bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_6592_orf2 Length=110 Score E Sequences producing significant alignments: (Bits) Value 7300337 35.4 0.030 SPBC13A2.01c 35.0 0.031 Hs19923387 33.1 0.12 At5g44200 32.7 0.17 CE09667 30.8 0.59 ECU02g0290 29.6 1.6 At4g38750 29.3 1.8 CE02598 28.1 4.7 CE09342 27.7 6.2 > 7300337 Length=154 Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust. Identities = 18/26 (69%), Positives = 19/26 (73%), Gaps = 0/26 (0%) Query 1 YGRGTTGRQWRDEWRDFYDPGRGGEG 26 YGRG TG Q RDE+R YD GRGG G Sbjct 115 YGRGKTGGQVRDEYRTDYDAGRGGYG 140 > SPBC13A2.01c Length=182 Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust. Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 0/29 (0%) Query 1 YGRGTTGRQWRDEWRDFYDPGRGGEGGER 29 YGRG +G Q RDE R+ +DPGRGG R Sbjct 117 YGRGASGGQVRDEMREEFDPGRGGYAKNR 145 > Hs19923387 Length=156 Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 0/26 (0%) Query 1 YGRGTTGRQWRDEWRDFYDPGRGGEG 26 YGRG +G Q RDE+R YD GRGG G Sbjct 125 YGRGRSGGQVRDEYRQDYDAGRGGYG 150 > At5g44200 Length=257 Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 4/39 (10%) Query 1 YGRGTTGRQWRDEWRDFYDPGRGGEGGERGKRAREEFEA 39 +GRG +G Q RDE+R YDP RGG GK ++E EA Sbjct 119 WGRGRSGGQVRDEYRTDYDPARGG----YGKLVQKELEA 153 > CE09667 Length=154 Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust. Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 0/24 (0%) Query 1 YGRGTTGRQWRDEWRDFYDPGRGG 24 YGRG G Q RDE+R YDP RGG Sbjct 122 YGRGKHGGQVRDEYRKDYDPERGG 145 > ECU02g0290 Length=305 Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%) Query 31 KRAREEFEA----CLMASQLPPVDQMAYARNTRHRWGPVG 66 +R E+F A CL+A+ L + +R T+ R+GP+G Sbjct 114 RRIIEDFSANTRFCLIANHLRKIISPILSRCTKFRFGPIG 153 > At4g38750 Length=1073 Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 10/64 (15%) Query 33 AREEFEACLMASQLPPVDQMAYARNTRHRWGPVGPRAGIGMPYGGHFPLEERRYSRGGQP 92 A+EEF++C S + NT+H W + P +G P + RG Sbjct 863 AKEEFDSCKRPSFI----------NTKHGWFSLAPLVCVGKPKITAVSISTALVVRGDTT 912 Query 93 QHEG 96 +H G Sbjct 913 EHPG 916 > CE02598 Length=608 Score = 28.1 bits (61), Expect = 4.7, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query 15 RDFYDPGRGGEGGERGKRAREEFEACLMASQLPPVD-----QMAYARNTRHRWGPVG 66 RD R E E RAR+EF++C ++L +D +AY R H +G Sbjct 289 RDAVSMKRWLEHPENQDRARQEFQSCSRFAKLKSIDITIDGNLAYLRFDAHTGDAMG 345 > CE09342 Length=296 Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust. Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 0/25 (0%) Query 52 MAYARNTRHRWGPVGPRAGIGMPYG 76 + Y RN R+ WG +GP G +G Sbjct 98 LKYVRNVRYEWGDIGPDFECGPTFG 122 Lambda K H 0.321 0.143 0.484 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1195973986 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40