bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_6139_orf1
Length=80
Score E
Sequences producing significant alignments: (Bits) Value
YHR128w 37.4 0.006
At1g55810 34.7 0.039
SPAC1B3.01c 34.3 0.053
SPAC1002.17c 33.1 0.12
SPAC1399.04c 33.1 0.13
At3g53900 33.1 0.14
At4g26510 32.3 0.19
7302796 30.8 0.59
Hs8923487 28.9 2.6
At3g27440 28.5 3.1
Hs22043058 28.1 3.7
At3g27190 28.1 4.0
Hs5803171 28.1 4.4
At4g16120 27.7 6.0
> YHR128w
Length=251
Score = 37.4 bits (85), Expect = 0.006, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 20/25 (80%), Gaps = 0/25 (0%)
Query 22 SIEAGLNDKNFLVPGIGDFGDRSCC 46
+++ GL++ +LVPG+GDFGDR C
Sbjct 226 ALDRGLDENKYLVPGLGDFGDRYYC 250
> At1g55810
Length=466
Score = 34.7 bits (78), Expect = 0.039, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 0/21 (0%)
Query 23 IEAGLNDKNFLVPGIGDFGDR 43
IE GLND+ +VPG+G+FGDR
Sbjct 439 IELGLNDEFRVVPGMGEFGDR 459
> SPAC1B3.01c
Length=219
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
Query 18 VFCCSIEAGLNDKNFLVPGIGDFGD 42
+ I+ GL++ ++VPG+GDFGD
Sbjct 188 IVTAVIDEGLDNNGYIVPGLGDFGD 212
> SPAC1002.17c
Length=189
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 23 IEAGLNDKNFLVPGIGDFGDR 43
++ L+ K +LVPG+GD GDR
Sbjct 163 VDKSLDAKGYLVPGVGDIGDR 183
> SPAC1399.04c
Length=220
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
Query 20 CCSIEAGLNDKNFLVPGIGDFGDRSCCCC 48
SI+ LN ++VPG GDFGDR C
Sbjct 192 TASIDPELNANKYVVPGCGDFGDRYFGTC 220
> At3g53900
Length=296
Score = 33.1 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
Query 18 VFCCSIEAGLNDKNFLVPGIGDFGDRS 44
V+ I+ +N+K +++PG+GD GDRS
Sbjct 261 VYAGIIDPEVNEKGYIIPGLGDAGDRS 287
> At4g26510
Length=198
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
Query 18 VFCCSIEAGLNDKNFLVPGIGDFGDR 43
+ I+ GLN++ ++PG+G+FGDR
Sbjct 166 IVTSEIDNGLNEEFRVIPGMGEFGDR 191
> 7302796
Length=614
Score = 30.8 bits (68), Expect = 0.59, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 18/22 (81%), Gaps = 0/22 (0%)
Query 22 SIEAGLNDKNFLVPGIGDFGDR 43
+++ +N K +++PGIG+FGDR
Sbjct 583 ALDPEINSKFYVIPGIGNFGDR 604
> Hs8923487
Length=548
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 0/26 (0%)
Query 18 VFCCSIEAGLNDKNFLVPGIGDFGDR 43
+ +++ +ND ++PGIG+FGDR
Sbjct 503 IITTAVDKRVNDLFRIIPGIGNFGDR 528
> At3g27440
Length=465
Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 17/21 (80%), Gaps = 0/21 (0%)
Query 23 IEAGLNDKNFLVPGIGDFGDR 43
I++ LN+ + ++PG+G+F DR
Sbjct 423 IDSSLNEDSRVIPGLGEFADR 443
> Hs22043058
Length=3631
Score = 28.1 bits (61), Expect = 3.7, Method: Composition-based stats.
Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 0/16 (0%)
Query 37 IGDFGDRSCCCCSCSC 52
+G+ +R+CCC C C
Sbjct 2306 LGNIAERTCCCTFCKC 2321
> At3g27190
Length=483
Score = 28.1 bits (61), Expect = 4.0, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 17/21 (80%), Gaps = 0/21 (0%)
Query 23 IEAGLNDKNFLVPGIGDFGDR 43
I+ LN++ ++PG+G+FGDR
Sbjct 457 IDQCLNEEFRVIPGLGEFGDR 477
> Hs5803171
Length=276
Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 0/34 (0%)
Query 46 CCCSCSCCCSYSAAAAAVAAAAAPVARAVCQVLW 79
CC + C + S AA AV A+++PV V W
Sbjct 168 CCVLTTPCLTQSTAAPAVRASSSPVTLRQKTVDW 201
> At4g16120
Length=661
Score = 27.7 bits (60), Expect = 6.0, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 0/28 (0%)
Query 40 FGDRSCCCCSCSCCCSYSAAAAAVAAAA 67
F D C +C+C CS + AA A +A A
Sbjct 429 FNDSIVPCKTCACGCSSNKAARACSATA 456
Lambda K H
0.334 0.138 0.508
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1165602088
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40