bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_5850_orf1
Length=118
Score E
Sequences producing significant alignments: (Bits) Value
At2g21390 97.8 4e-21
At1g62020 96.3 1e-20
7292122 95.9 2e-20
Hs4758030 89.0 2e-18
SPBPJ4664.04 87.0 8e-18
CE29136 84.3 5e-17
YDL145c 83.2 1e-16
Hs20542574 31.6 0.41
SPCC162.07 30.0 1.2
At3g07970 29.3 2.0
At2g35140 27.3 7.4
> At2g21390
Length=1218
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query 1 WDPELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMDRRAQLHCKPVA 60
WD + G F Y TL+H+K+C+ NGD GI+ +L IYI V+ + +DR + +
Sbjct 537 WD-DNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITIN 595
Query 61 CNDYLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYLKEKGYSEVALEFLSDRKSKF 116
+Y+FK+A R+ Y V +++ LCG ++I YL++KG+ EVAL F+ D + +F
Sbjct 596 ATEYIFKLALLRKKYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRF 651
> At1g62020
Length=1216
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query 1 WDPELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMDRRAQLHCKPVA 60
WD + G F Y TL+H+K+C+ NGD GI+ +L IYI V+ + +DR + +
Sbjct 537 WD-DNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAITIN 595
Query 61 CNDYLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYLKEKGYSEVALEFLSDRKSKF 116
+Y+FK++ R+ Y V +++ LCG ++I YL++KG+ EVAL F+ D + +F
Sbjct 596 ATEYIFKLSLLRKRYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRF 651
> 7292122
Length=1234
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query 1 WDPELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMDRRAQLHCKPVA 60
WD E G F Y T +H+K+ +TNGD GI+ +L IY+ V Q+ +DR + +
Sbjct 534 WD-ESGVFIYTTSNHIKYAITNGDHGIIRTLDLPIYLTRVKGNQVFCLDRECRTRVLHID 592
Query 61 CNDYLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYLKEKGYSEVALEFLSDRKSKF 116
+Y FK+A +R Y +V +VR L G S+I YL++KGY EVAL F+ D K++F
Sbjct 593 PTEYKFKLALIQRKYDEVLHMVRNARLVGQSIIAYLQQKGYPEVALHFVKDEKTRF 648
> Hs4758030
Length=1224
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query 1 WDPELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMDRRAQLHCKPVA 60
WD E G F Y T +H+K+ +T GD GI+ +L IY+ V + +DR + +
Sbjct 535 WD-ESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTID 593
Query 61 CNDYLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYLKEKGYSEVALEFLSDRKSKF 116
++ FK+A R Y +V +VR L G S+I YL++KGY EVAL F+ D K++F
Sbjct 594 PTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRF 649
> SPBPJ4664.04
Length=1207
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 69/113 (61%), Gaps = 0/113 (0%)
Query 4 ELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMDRRAQLHCKPVACND 63
E YATL H+K+ + +GD G++ +L ++Y+V + ++R A+ + +
Sbjct 544 ENNVLLYATLDHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFEIDPTE 603
Query 64 YLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYLKEKGYSEVALEFLSDRKSKF 116
YLFK+A R+DY +V L++ L G ++I YL++KGY E+AL+F+ D ++F
Sbjct 604 YLFKLALLRKDYEQVLHLIQNSNLVGQAIIAYLQKKGYPEIALQFVEDPSTRF 656
> CE29136
Length=1232
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query 1 WDPELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMDRRAQLHCKPVA 60
WD + F Y T +H+K+ + +GD GIV +L +YI+ + L ++R A P+
Sbjct 539 WDDD-SVFLYTTSNHIKYAINSGDCGIVRTLDLPLYILAIRGNVLYCLNRDATPVEVPID 597
Query 61 CNDYLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYLKEKGYSEVALEFLSDRKSKF 116
+DY FK+A + +V +VR L G S+IGYL++KGY E+AL F+ D K++F
Sbjct 598 NSDYKFKLALINKRIDEVVNMVRSANLVGQSIIGYLEKKGYPEIALHFVKDEKTRF 653
> YDL145c
Length=1201
Score = 83.2 bits (204), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Query 1 WDPELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLY-MDRRAQLHCKPV 59
WD E G Y+TL+H+++ + NGD+GI+ +L +++YI V Q +L+Y ++R ++ +
Sbjct 539 WD-ETGVLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKV-QGKLVYCLNREGEIEILTI 596
Query 60 ACNDYLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYLKEKGYSEVALEFLSDRKSKF 116
+Y FK A +++ +V L++ L G ++I YL++ GY E+AL+F+ D +F
Sbjct 597 DPTEYRFKKALVNKNFPEVLRLIKDSNLVGQNIISYLQKSGYPEIALQFVQDPHIRF 653
> Hs20542574
Length=205
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 0/42 (0%)
Query 39 TVAQQQLLYMDRRAQLHCKPVACNDYLFKVAPSRRDYMKVAL 80
TVA+Q L+ +++ L C P C D L V R + + +
Sbjct 26 TVAKQLLMTLNKAEVLECLPAVCMDLLLPVTAQRNSLIPLGI 67
> SPCC162.07
Length=706
Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query 10 YATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMD 49
+ +LS +++C+ NG + +V ++IYI+T ++ +Y+D
Sbjct 77 FKSLSLLEYCLHNGSENVVRWAKDNIYIITTL-REFVYVD 115
> At3g07970
Length=438
Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query 49 DRRAQLHCKPVACND--YLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYL 96
D +A + AC+ ++ VAP RDYM A V + G C +SLI ++
Sbjct 85 DSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKA--VTFSGPCKSSLIIFI 132
> At2g35140
Length=879
Score = 27.3 bits (59), Expect = 7.4, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 0/70 (0%)
Query 2 DPELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMDRRAQLHCKPVAC 61
+PE G F + S K C++ G+ L + V L+ + +LH AC
Sbjct 19 EPEYGAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQAC 78
Query 62 NDYLFKVAPS 71
+D + P+
Sbjct 79 SDGAINIEPN 88
Lambda K H
0.326 0.140 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1167969826
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40