bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_5522_orf1
Length=87
Score E
Sequences producing significant alignments: (Bits) Value
CE09598 48.5 3e-06
7300143 46.2 2e-05
Hs10835059 44.7 4e-05
At5g40280 42.4 2e-04
At2g39550 38.1 0.004
YDL090c 37.0 0.009
YGL155w 36.2 0.015
7296904 35.8 0.018
SPAC2E1P5.04c 33.9 0.084
Hs21359854 33.5 0.091
HsM4759018 33.5 0.092
SPAC17G6.04c 32.7 0.15
YPR176c 32.7 0.16
Hs4826900 32.7 0.16
At5g12210 32.0 0.31
CE24762 31.2 0.43
7295883 31.2 0.44
At3g12070 31.2 0.47
SPAC167.02 31.2 0.54
CE22159 30.8 0.71
ECU08g1290 30.4 0.80
7301904 29.6 1.4
> CE09598
Length=401
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/24 (79%), Positives = 20/24 (83%), Gaps = 0/24 (0%)
Query 2 KQRGFEGGFQGRTQKLVDSCYSFW 25
+Q FEGGFQGRT KLVD CYSFW
Sbjct 268 RQMRFEGGFQGRTNKLVDGCYSFW 291
> 7300143
Length=419
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%), Gaps = 0/25 (0%)
Query 2 KQRGFEGGFQGRTQKLVDSCYSFWL 26
+Q +EGGFQGRT KLVD CYSFW+
Sbjct 270 RQMTYEGGFQGRTNKLVDGCYSFWV 294
> Hs10835059
Length=437
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 0/25 (0%)
Query 1 TKQRGFEGGFQGRTQKLVDSCYSFW 25
++Q FEGGFQGR KLVD CYSFW
Sbjct 279 SRQMRFEGGFQGRCNKLVDGCYSFW 303
> At5g40280
Length=482
Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 19/23 (82%), Gaps = 0/23 (0%)
Query 3 QRGFEGGFQGRTQKLVDSCYSFW 25
++G E GFQGRT KLVD CY+FW
Sbjct 288 RQGVEMGFQGRTNKLVDGCYTFW 310
> At2g39550
Length=375
Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 20/25 (80%), Gaps = 0/25 (0%)
Query 2 KQRGFEGGFQGRTQKLVDSCYSFWL 26
+++ +GGFQGRT K D+CY+FW+
Sbjct 274 QRQANDGGFQGRTNKPSDTCYAFWI 298
> YDL090c
Length=431
Score = 37.0 bits (84), Expect = 0.009, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
Query 2 KQRGFEGGFQGRTQKLVDSCYSFWL 26
+Q E GF GR+ KLVD CYSFW+
Sbjct 290 RQLQEERGFCGRSNKLVDGCYSFWV 314
> YGL155w
Length=376
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 0/19 (0%)
Query 7 EGGFQGRTQKLVDSCYSFW 25
+GGFQGR K D+CY+FW
Sbjct 274 DGGFQGRENKFADTCYAFW 292
> 7296904
Length=395
Score = 35.8 bits (81), Expect = 0.018, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
Query 9 GFQGRTQKLVDSCYSFWL 26
GFQGR K VD+CYSFW+
Sbjct 249 GFQGRPNKPVDTCYSFWI 266
> SPAC2E1P5.04c
Length=355
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 18/68 (26%)
Query 8 GGFQGRTQKLVDSCYSFWLVR----------ITGS-------VHTTHLALQLLTVHSGDA 50
GG GRT K VD+CY++W++ I G +H H AL + G+
Sbjct 249 GGLNGRTNKDVDTCYAYWVLSSLKLLDALPFIDGGELEKYLLLHAQH-ALGGFSKTPGEF 307
Query 51 PKLLHACI 58
P +LH+ +
Sbjct 308 PDVLHSAL 315
> Hs21359854
Length=331
Score = 33.5 bits (75), Expect = 0.091, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query 8 GGFQGRTQKLVDSCYSFWL---VRITGSVH 34
GG GR +KL D CYS+W+ ++I G +H
Sbjct 227 GGLNGRPEKLPDVCYSWWVLASLKIIGRLH 256
> HsM4759018
Length=331
Score = 33.5 bits (75), Expect = 0.092, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query 8 GGFQGRTQKLVDSCYSFWL---VRITGSVH 34
GG GR +KL D CYS+W+ ++I G +H
Sbjct 227 GGLNGRPEKLPDVCYSWWVLASLKIIGRLH 256
> SPAC17G6.04c
Length=382
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
Query 9 GFQGRTQKLVDSCYSFWL 26
GF GR+ KLVD CYS+W+
Sbjct 243 GFSGRSNKLVDGCYSWWV 260
> YPR176c
Length=325
Score = 32.7 bits (73), Expect = 0.16, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 7 EGGFQGRTQKLVDSCYSFWLV 27
EGG GR KL D CYS+W++
Sbjct 222 EGGLNGRPSKLPDVCYSWWVL 242
> Hs4826900
Length=377
Score = 32.7 bits (73), Expect = 0.16, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 0/20 (0%)
Query 7 EGGFQGRTQKLVDSCYSFWL 26
+ G+ GR K VD+CYSFW+
Sbjct 257 QNGYHGRPNKPVDTCYSFWV 276
> At5g12210
Length=313
Score = 32.0 bits (71), Expect = 0.31, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 0/20 (0%)
Query 8 GGFQGRTQKLVDSCYSFWLV 27
GG GR +KL D CYS+W++
Sbjct 213 GGLNGRPEKLADVCYSWWVL 232
> CE24762
Length=335
Score = 31.2 bits (69), Expect = 0.43, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 0/20 (0%)
Query 8 GGFQGRTQKLVDSCYSFWLV 27
GG GR +KL D CYS+W++
Sbjct 233 GGLNGRPEKLPDVCYSWWVL 252
> 7295883
Length=347
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query 8 GGFQGRTQKLVDSCYSFWL---VRITGSVH 34
GG GR +KL D CYS+W+ + I G +H
Sbjct 241 GGLNGRPEKLPDVCYSWWVLASLTIMGRLH 270
> At3g12070
Length=317
Score = 31.2 bits (69), Expect = 0.47, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 0/20 (0%)
Query 8 GGFQGRTQKLVDSCYSFWLV 27
GG GR +KL D CYS+W++
Sbjct 217 GGLNGRPEKLPDVCYSWWVL 236
> SPAC167.02
Length=311
Score = 31.2 bits (69), Expect = 0.54, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 0/18 (0%)
Query 8 GGFQGRTQKLVDSCYSFW 25
GG GR +KL DSCY +W
Sbjct 213 GGLNGRPEKLPDSCYGWW 230
> CE22159
Length=360
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 0/18 (0%)
Query 9 GFQGRTQKLVDSCYSFWL 26
GF GR K DSCY+FW+
Sbjct 257 GFHGRAHKPDDSCYAFWI 274
> ECU08g1290
Length=358
Score = 30.4 bits (67), Expect = 0.80, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query 1 TKQRGFEGGFQGRTQKLVDSCYSFW 25
TKQ GG GR K D CYSFW
Sbjct 265 TKQAS-SGGLSGRVSKKEDVCYSFW 288
> 7301904
Length=377
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 0/34 (0%)
Query 51 PKLLHACIFANFIHWLVCTCRYSCLCALSIFHLW 84
P+ LHAC+F + ++CT CL A+S+ W
Sbjct 106 PRNLHACLFTVSLLVVLCTISIFCLVAVSVDRYW 139
Lambda K H
0.332 0.140 0.494
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1187582654
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40