bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_4998_orf3 Length=82 Score E Sequences producing significant alignments: (Bits) Value CE24948 37.0 0.008 CE23597 35.0 0.037 Hs15147337 33.9 0.082 At3g02260 33.9 0.082 7295802 32.0 0.27 Hs8923194_1 30.4 0.92 7297337 29.6 1.3 Hs20533896 29.6 1.5 7290539 29.3 1.7 At2g13790 28.1 4.4 7296086 27.7 5.7 7299235 27.3 6.7 CE27388 27.3 6.8 Hs8923305 26.9 9.1 > CE24948 Length=2944 Score = 37.0 bits (84), Expect = 0.008, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%) Query 24 CTSGGTGNALCMQRRFGCKTCSSSSCCCCCSSCCCCCCK----RPQRVSVTS-CGSF--- 75 C+ TG Q + CKTC + CCCS C C + R +R S T+ C + Sbjct 1204 CSFTWTGEDHINQDIYECKTCGLTGSLCCCSECALTCHRNHDCRLKRTSPTAYCDCWEKS 1263 Query 76 AANCAA 81 + NC A Sbjct 1264 SCNCKA 1269 > CE23597 Length=1131 Score = 35.0 bits (79), Expect = 0.037, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query 24 CTSGGTGNALCMQRRFGCKTCSSSSCCCCCSSCCCCCCKRPQRVSVTSCGSFAANCA 80 CT TG A Q + C TC+ C S C C R ++ + GSF +C Sbjct 794 CTYKSTGRAYVTQHWYNCYTCNMMESEGVC-SVCAINCHRGHDLAYSKKGSFFCDCG 849 > Hs15147337 Length=2799 Score = 33.9 bits (76), Expect = 0.082, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 0/43 (0%) Query 20 CAFACTSGGTGNALCMQRRFGCKTCSSSSCCCCCSSCCCCCCK 62 C C+ TG Q F C+TC CCC+ C C K Sbjct 1175 CNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHK 1217 > At3g02260 Length=5079 Score = 33.9 bits (76), Expect = 0.082, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query 24 CTSGGTGNALCMQRRFGCKTCSSSSCCCCCSSCCCCCCKRPQRVSVTSCGSFAANCAA 81 CT +G+ Q + C TC + CCS C C R RV + F +C A Sbjct 1575 CTFTSSGSNFMEQHWYFCYTCDLTVSKGCCSV-CAKVCHRGHRVVYSRSSRFFCDCGA 1631 > 7295802 Length=773 Score = 32.0 bits (71), Expect = 0.27, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 15/54 (27%) Query 18 PNCAFACTSGGTGNALCMQRRFGCKTCSSSSCCC-----CCSSCCCCCCKRPQR 66 P C C G+ N L TC +S C C C+ C C CCK P + Sbjct 523 PKCR--CGISGSSNTL--------TTCRNSRCPCYKSYNSCAGCHCVCCKNPHK 566 > Hs8923194_1 Length=519 Score = 30.4 bits (67), Expect = 0.92, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 0/35 (0%) Query 15 DFLPNCAFACTSGGTGNALCMQRRFGCKTCSSSSC 49 D +CA +C GG + L +R C CSS C Sbjct 302 DGAKDCACSCHEGGPDSKLKKSKRRSCSHCSSKVC 336 > 7297337 Length=5322 Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query 24 CTSGGTGNALCMQRRFGCKTCSSSSCCCCCSSCCCCCCKRPQRVSVTSCGSFAANCAA 81 CT T Q + C TC+ + CS C C K VS G+F +C A Sbjct 1796 CTFSQTQKEFMNQHWYHCHTCNMINTVGVCSVCARVCHK-GHDVSYAKYGNFFCDCGA 1852 > Hs20533896 Length=5183 Score = 29.6 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 1/62 (1%) Query 20 CAFACTSGGTGNALCMQRRFGCKTCSSSSCCCCCSSCCCCCCKRPQRVSVTSCGSFAANC 79 C CT T Q + C TC C + C C + +S GSF +C Sbjct 1658 CNKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVC-TVCAKVCHKDHEISYAKYGSFFCDC 1716 Query 80 AA 81 A Sbjct 1717 GA 1718 > 7290539 Length=592 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 0/16 (0%) Query 45 SSSSCCCCCSSCCCCC 60 S + CCC CS+C CC Sbjct 246 SKALCCCLCSNCGYCC 261 > At2g13790 Length=520 Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%) Query 40 GCKTCSSS--SCCCCCSSCCC 58 G CS+S SCC C +S CC Sbjct 142 GANDCSNSRGSCCRCSTSICC 162 > 7296086 Length=305 Score = 27.7 bits (60), Expect = 5.7, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 0/23 (0%) Query 39 FGCKTCSSSSCCCCCSSCCCCCC 61 FGC+TC S C CS CC C Sbjct 4 FGCRTCKSQPDCEGCSPKCCSPC 26 > 7299235 Length=2165 Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 0/34 (0%) Query 29 TGNALCMQRRFGCKTCSSSSCCCCCSSCCCCCCK 62 TG Q F CKTC + CCC+ C C K Sbjct 1221 TGADHINQNIFECKTCGLTGSLCCCTECARVCHK 1254 > CE27388 Length=936 Score = 27.3 bits (59), Expect = 6.8, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query 20 CAFACTSGGTGNALCMQRRFGCKTCSSSSCCCCCSSCCCCCCKRPQRVSVTSCGSFAANC 79 C F +S N+ M + C TC+++ C++ C C R V + F +C Sbjct 845 CLFKVSSN---NSFPMHNFYRCTTCNTTERNAICTN-CIRTCHRGHSVELVRFDRFFCDC 900 Query 80 AA 81 A Sbjct 901 GA 902 > Hs8923305 Length=626 Score = 26.9 bits (58), Expect = 9.1, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 0/20 (0%) Query 44 CSSSSCCCCCSSCCCCCCKR 63 C++ +C SCCCC C R Sbjct 598 CTTWACWAAGPSCCCCPCTR 617 Lambda K H 0.331 0.133 0.503 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1159278568 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40