bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_4611_orf1 Length=116 Score E Sequences producing significant alignments: (Bits) Value Hs15553097 43.5 9e-05 CE02241 35.8 0.020 7295858 35.4 0.027 YIL110w 33.5 0.10 CE03450 32.3 0.19 SPAC1071.05 31.6 0.36 At4g14000 30.0 1.1 Hs16507235 28.5 3.2 At5g52400 28.5 3.4 Hs9624971 28.1 4.3 > Hs15553097 Length=372 Score = 43.5 bits (101), Expect = 9e-05, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Query 18 VPVCPVFCHVRM--FDSLLFARRFSCALLVCALFELQLPMQVEKGVYEGGFSIWECTWDL 75 + P F HV++ ++L F +V F + GVYEGG IWECT+DL Sbjct 118 IETLPGFQHVKLSVVKTILLKENFPGENIVSKSFSSHSDLIT--GVYEGGLKIWECTFDL 175 Query 76 LGFLLRADSKEA 87 L + +A K A Sbjct 176 LAYFTKAKVKFA 187 > CE02241 Length=675 Score = 35.8 bits (81), Expect = 0.020, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 9/74 (12%) Query 6 QHLQACFSPSVYVPVCPV-------FCHVRMFDSLLFARRFSCALLVCALFELQLPMQVE 58 + L+ CF P + +C + FCH+ +F+S+ F C L + F +Q+ + + Sbjct 601 EMLRKCFFPCIASVICSIAVFVPTMFCHINIFESVAFTNNVFCLLGIVIAFFVQVMLNML 660 Query 59 KGVYEGGFSIWECT 72 ++ G + W C+ Sbjct 661 PDMFTG--THWFCS 672 > 7295858 Length=249 Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust. Identities = 15/20 (75%), Positives = 16/20 (80%), Gaps = 0/20 (0%) Query 60 GVYEGGFSIWECTWDLLGFL 79 GVYEGG IWECT DLL +L Sbjct 54 GVYEGGAKIWECTEDLLLYL 73 > YIL110w Length=377 Score = 33.5 bits (75), Expect = 0.10, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 0/23 (0%) Query 57 VEKGVYEGGFSIWECTWDLLGFL 79 + K +YEGG WEC++DL+ L Sbjct 123 LRKNIYEGGLKSWECSYDLVDLL 145 > CE03450 Length=229 Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust. Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 0/18 (0%) Query 62 YEGGFSIWECTWDLLGFL 79 YEGGF IWECT DL ++ Sbjct 50 YEGGFKIWECTVDLCDYI 67 > SPAC1071.05 Length=339 Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query 60 GVYEGGFSIWECTWDLLGFLLRADSKEAIRARELVTG-GHVLDXXECFRR 108 VYEGG+ WEC+ DL + + D + L G G + CF+ Sbjct 97 NVYEGGYKTWECSLDLANEIKKIDVVKNNLTTVLELGCGSAIPILSCFQE 146 > At4g14000 Length=269 Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%) Query 60 GVYEGGFSIWECTWDLLGFLLRADSKEAIRARELVTGGHVLD 101 GVYEGG +WE + D L++A KE+ +G VL+ Sbjct 83 GVYEGGLKLWEGSID----LVKALEKESQTGNLSFSGKRVLE 120 > Hs16507235 Length=4523 Score = 28.5 bits (62), Expect = 3.2, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query 41 CALLVCALFELQLPMQVEKGVYEGGFSIWECTWDLLGFLLR 81 C LL C L +P K VYE F ++ C W G LL+ Sbjct 2388 CVLLECLLTPENVPSDSPKEVYEVYF-VFACIWAFGGTLLQ 2427 > At5g52400 Length=530 Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 0/21 (0%) Query 74 DLLGFLLRADSKEAIRARELV 94 DLLG LL+AD K A+ELV Sbjct 300 DLLGMLLKADQKGNFTAKELV 320 > Hs9624971 Length=247 Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query 39 FSCALLVCALFELQLPMQVEKGVYEGGFSIWECTWDLLGFLLR 81 +S A L+C + LP+ VE+ Y G +IW LG LL Sbjct 54 YSLANLMCNC-KTVLPLAVERTSYNGHLTIWFTDTSALGHLLN 95 Lambda K H 0.332 0.143 0.479 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1174970866 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40