bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_4611_orf1
Length=116
Score E
Sequences producing significant alignments: (Bits) Value
Hs15553097 43.5 9e-05
CE02241 35.8 0.020
7295858 35.4 0.027
YIL110w 33.5 0.10
CE03450 32.3 0.19
SPAC1071.05 31.6 0.36
At4g14000 30.0 1.1
Hs16507235 28.5 3.2
At5g52400 28.5 3.4
Hs9624971 28.1 4.3
> Hs15553097
Length=372
Score = 43.5 bits (101), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query 18 VPVCPVFCHVRM--FDSLLFARRFSCALLVCALFELQLPMQVEKGVYEGGFSIWECTWDL 75
+ P F HV++ ++L F +V F + GVYEGG IWECT+DL
Sbjct 118 IETLPGFQHVKLSVVKTILLKENFPGENIVSKSFSSHSDLIT--GVYEGGLKIWECTFDL 175
Query 76 LGFLLRADSKEA 87
L + +A K A
Sbjct 176 LAYFTKAKVKFA 187
> CE02241
Length=675
Score = 35.8 bits (81), Expect = 0.020, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query 6 QHLQACFSPSVYVPVCPV-------FCHVRMFDSLLFARRFSCALLVCALFELQLPMQVE 58
+ L+ CF P + +C + FCH+ +F+S+ F C L + F +Q+ + +
Sbjct 601 EMLRKCFFPCIASVICSIAVFVPTMFCHINIFESVAFTNNVFCLLGIVIAFFVQVMLNML 660
Query 59 KGVYEGGFSIWECT 72
++ G + W C+
Sbjct 661 PDMFTG--THWFCS 672
> 7295858
Length=249
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 16/20 (80%), Gaps = 0/20 (0%)
Query 60 GVYEGGFSIWECTWDLLGFL 79
GVYEGG IWECT DLL +L
Sbjct 54 GVYEGGAKIWECTEDLLLYL 73
> YIL110w
Length=377
Score = 33.5 bits (75), Expect = 0.10, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
Query 57 VEKGVYEGGFSIWECTWDLLGFL 79
+ K +YEGG WEC++DL+ L
Sbjct 123 LRKNIYEGGLKSWECSYDLVDLL 145
> CE03450
Length=229
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 0/18 (0%)
Query 62 YEGGFSIWECTWDLLGFL 79
YEGGF IWECT DL ++
Sbjct 50 YEGGFKIWECTVDLCDYI 67
> SPAC1071.05
Length=339
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query 60 GVYEGGFSIWECTWDLLGFLLRADSKEAIRARELVTG-GHVLDXXECFRR 108
VYEGG+ WEC+ DL + + D + L G G + CF+
Sbjct 97 NVYEGGYKTWECSLDLANEIKKIDVVKNNLTTVLELGCGSAIPILSCFQE 146
> At4g14000
Length=269
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query 60 GVYEGGFSIWECTWDLLGFLLRADSKEAIRARELVTGGHVLD 101
GVYEGG +WE + D L++A KE+ +G VL+
Sbjct 83 GVYEGGLKLWEGSID----LVKALEKESQTGNLSFSGKRVLE 120
> Hs16507235
Length=4523
Score = 28.5 bits (62), Expect = 3.2, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query 41 CALLVCALFELQLPMQVEKGVYEGGFSIWECTWDLLGFLLR 81
C LL C L +P K VYE F ++ C W G LL+
Sbjct 2388 CVLLECLLTPENVPSDSPKEVYEVYF-VFACIWAFGGTLLQ 2427
> At5g52400
Length=530
Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 74 DLLGFLLRADSKEAIRARELV 94
DLLG LL+AD K A+ELV
Sbjct 300 DLLGMLLKADQKGNFTAKELV 320
> Hs9624971
Length=247
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query 39 FSCALLVCALFELQLPMQVEKGVYEGGFSIWECTWDLLGFLLR 81
+S A L+C + LP+ VE+ Y G +IW LG LL
Sbjct 54 YSLANLMCNC-KTVLPLAVERTSYNGHLTIWFTDTSALGHLLN 95
Lambda K H
0.332 0.143 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1174970866
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40