bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_3832_orf4
Length=137
Score E
Sequences producing significant alignments: (Bits) Value
At5g27430 56.2 2e-08
At3g05230 55.1 4e-08
7301130 51.6 4e-07
Hs11345462 40.0 0.001
CE00269 39.7 0.002
YLR066w 38.9 0.003
At3g51290 30.0 1.2
Hs4557535 29.3 2.5
At3g57630 28.5 4.0
Hs8922110 28.1 4.7
> At5g27430
Length=167
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query 8 SGSIPVKDVYGFSYNSPLNGDQAVFFLDKKADLGGLFQGNAKQGSLFVGAEYETPQPPTN 67
S I + ++ F P D+ L+ ADL LF N KQ FV AEYET + N
Sbjct 38 SAQIQILNINWFQ-KQPHGNDEVSLTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALN 96
Query 68 QGGGFAPIIMDDGVAVIDGPNPPGKSHFRNKGGGLGGPEVTVNLQVFSPPIGGRMYPQTF 127
Q + II + A K F ++G L G + + L P G+M+
Sbjct 97 QVSLWDAIIPEKEHAKF-WIQISNKYRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKI 155
Query 128 ARNPFRMPG 136
+ +R+P
Sbjct 156 VMSGYRLPN 164
> At3g05230
Length=167
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query 8 SGSIPVKDVYGFSYNSPLNGDQAVFFLDKKADLGGLFQGNAKQGSLFVGAEYETPQPPTN 67
S I + ++ F S N D+ LD ADL LF N KQ +FV AEYETP+ N
Sbjct 38 SAEIQILNINRFKKQSHGN-DEVSLTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLN 96
Query 68 QGGGFAPII--MDDGVAVIDGPNPPGKSHFRNKGGGLGGPEVTVNLQVFSPPIGGRMYP 124
Q + II + I N K F ++G L G + + L P G+M+
Sbjct 97 QVSLWDAIIPAKEHAKFRIQVSN---KYRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFA 152
> 7301130
Length=179
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 0/68 (0%)
Query 35 DKKADLGGLFQGNAKQGSLFVGAEYETPQPPTNQGGGFAPIIMDDGVAVIDGPNPPGKSH 94
D + +L G+F N KQ L++ AEY+TP NQ + II+ AV+D N K +
Sbjct 69 DLQTNLTGIFNWNVKQLFLYLTAEYQTPANQLNQVVLWDKIILRGDNAVLDFKNMNTKYY 128
Query 95 FRNKGGGL 102
F + G GL
Sbjct 129 FWDDGNGL 136
> Hs11345462
Length=180
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query 35 DKKADLGGLFQGNAKQGSLFVGAEYETPQPPTNQGGGFAPIIMDDGVAVIDGPNP----- 89
D ADL +F N KQ L++ AEY T NQ +++ D + V+ G NP
Sbjct 69 DITADLENIFDWNVKQLFLYLSAEYSTKNNALNQ------VVLWDKI-VLRGDNPKLLLK 121
Query 90 --PGKSHFRNKGGGL-GGPEVTVNLQ 112
K F + G GL G VT+ L
Sbjct 122 DMKTKYFFFDDGNGLKGNRNVTLTLS 147
> CE00269
Length=180
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query 3 PRGPISGSIPVKDVYGFSYNSPLNGDQAVFFLDKKADLGGLFQGNAKQGSLFVGAEYETP 62
P + V++V ++ + D A + K D +F N KQ +++ AEY++
Sbjct 38 PTKLTVNDVKVRNVVDYATDEQ-QADLATLNFNLKVDFSKIFNWNVKQLFVYLVAEYKSK 96
Query 63 QPPTNQGGGFAPIIMDDGVAVIDGPNPPGKSHFRNKGGGL 102
NQ + I+ V+D K +F + G L
Sbjct 97 VNEVNQVVLWDRIVERADRVVMDEIGVKSKYYFLDDGTNL 136
> YLR066w
Length=184
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query 34 LDKKADLGGLFQGNAKQGSLFVGAEYETPQPPTNQGGGFAPIIMDDGVAVIDGPNPPGK- 92
D DL LF N KQ +++ AEY + + T++ + II AVID + K
Sbjct 76 FDLNTDLTPLFNWNTKQVFVYLTAEYNSTEKITSEVTFWDKIIKSKDDAVIDVNDLRSKY 135
Query 93 SHFRNKGGGLGGPEVTVNLQV-FSPPIGGRMYPQT 126
S + + G G ++ L P +G Y +T
Sbjct 136 SIWDIEDGKFEGKDLVFKLHWNVQPWVGLLTYGET 170
> At3g51290
Length=602
Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 16/62 (25%)
Query 44 FQGNAKQGSLFVGAEYETPQPPTN-QGGGFAPIIMDDGVAVIDGPNPPGKSHFRNKGGGL 102
F G++K G ++ + YE PT+ GFAP + S +RN GG +
Sbjct 236 FSGHSKSGKMYSSSNYECNLNPTSFWTRGFAPSKL---------------SEYRNAGGVI 280
Query 103 GG 104
GG
Sbjct 281 GG 282
> Hs4557535
Length=764
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 0/65 (0%)
Query 13 VKDVYGFSYNSPLNGDQAVFFLDKKADLGGLFQGNAKQGSLFVGAEYETPQPPTNQGGGF 72
V VY Y+ PL+G+Q + L + G+F+G A +L A E+ T G
Sbjct 357 VASVYSLKYDYPLDGNQELIALGLGNIVCGVFRGFAGSTALSRSAVQESTGGKTQIAGLI 416
Query 73 APIIM 77
II+
Sbjct 417 GAIIV 421
> At3g57630
Length=736
Score = 28.5 bits (62), Expect = 4.0, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 0/40 (0%)
Query 12 PVKDVYGFSYNSPLNGDQAVFFLDKKADLGGLFQGNAKQG 51
PV + GF NSP N D+ K DL L ++KQG
Sbjct 198 PVPESCGFQINSPTNPDEPKMTDWSKPDLDILTTNSSKQG 237
> Hs8922110
Length=510
Score = 28.1 bits (61), Expect = 4.7, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 0/35 (0%)
Query 62 PQPPTNQGGGFAPIIMDDGVAVIDGPNPPGKSHFR 96
P P ++ G + + A++ GP PP +SHFR
Sbjct 247 PDPDSSNSGFDSSVASQITEALVSGPKPPIESHFR 281
Lambda K H
0.317 0.144 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1461889840
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40