bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_3690_orf1 Length=401 Score E Sequences producing significant alignments: (Bits) Value CE05478 42.0 0.002 7299013 36.6 0.089 Hs5803127 31.6 3.6 Hs19923531 30.8 4.9 > CE05478 Length=416 Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust. Identities = 62/281 (22%), Positives = 123/281 (43%), Gaps = 24/281 (8%) Query 21 SLRDVRLPT-WQELQRYVRDPEILTSEILFLILTLSNIFVVYRLFLDI-VPFPVFVTWWQ 78 ++R+ PT W+ + +++T+ + + ++ +F+ L + + P+F+TW+Q Sbjct 67 AMRNRENPTKWESYK------QVITAVSAYWVFSIGLVFLNKYLLSSVQLDAPLFITWYQ 120 Query 79 LAQGLLMAWCLGEVGQEYPKLAYFPRVEIDKRLLRRLFVPTIVNALMLVLANVLLYRVQC 138 + + L + + Y L FP + ID ++ R + ++V M+ N+ L V Sbjct 121 CLVTVFLCLFLSKTSKAYG-LFKFPSMPIDAKISREVLPLSVVFVAMISFNNLCLKYVG- 178 Query 139 IATLPVVVAFAVVLHHVTRFVGCGEEYMPMRWQAIG---LLFTAFLLGITDSKTVGSEVL 195 ++ V + V + V ++ G++ QAIG L+ FLLG+ G+ Sbjct 179 VSFYYVGRSLTTVFNVVCTYLILGQK---TSGQAIGCCALIIFGFLLGVDQEGVTGTLSY 235 Query 196 PWAL--LYAIFSAAFRAAFLQKVMHEVEGKGNLLHNHQHLISVIILPILMIICGE-GSVL 252 + + A S A A + +KV+ V L + +L ++++ LM+ GE G+V Sbjct 236 TGVIFGVLASLSVALNAIYTRKVLSSVGDCLWRLTMYNNLNALVLFLPLMLFNGEFGAVF 295 Query 253 SAMPMNFGSLYTWQTWGCLFTVGALPFLKNIVSNRLIRRTG 293 F L+ W + G F+ V+ I+ T Sbjct 296 Y-----FDKLFDTTFWILMTLGGVFGFMMGYVTGWQIQATS 331 > 7299013 Length=337 Score = 36.6 bits (83), Expect = 0.089, Method: Compositional matrix adjust. Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 28/210 (13%) Query 71 PVFVTWWQLAQGLLMAWCLGEVGQEYPKLAYFPRVE-IDKRLLRRLFVPTIVNALMLVLA 129 P+F++W+Q ++ + + ++YP + FP +D R++ +++ LM+ Sbjct 50 PLFMSWFQCVVSTVICFVASRLSRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGAN 109 Query 130 NVLLYRVQCIATLPVVVAFAVVLHHVTRFVGCGEEYMPMRWQ-------AIGLLFTAFLL 182 N+ L V VAF + +T Y+ +R + G + F L Sbjct 110 NLSLSY--------VTVAFYYIGRSLTTVFSVVLTYVILRQRTSFKCLLCCGAIVVGFWL 161 Query 183 GITDSKTVGSEVLPW-ALLYAIFSAAFRAAF---LQKVMHEVEGKGNLLHNHQHLISVII 238 G+ D +++ +EV W ++ + S+ A F +K + V + LL + +L S ++ Sbjct 162 GV-DQESL-TEVFSWRGTIFGVLSSLALAMFSIQTKKSLGYVNQEVWLLSYYNNLYSTLL 219 Query 239 LPILMIICGEGSVLSAMPMNFGSLYTWQTW 268 L+II GE + P + W +W Sbjct 220 FLPLIIINGELESIITYP------HLWASW 243 > Hs5803127 Length=76 Score = 31.6 bits (70), Expect = 3.6, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query 332 GRALGACDVLLNAAEAEQNEMRPSGATRHTGDTEGGELERGSNSKQYLQSIEEDSGEAYG 391 GR D+L+++A NE+ A TEG E + S+++Q SGEA G Sbjct 18 GRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSSTEQ--------SGEAQG 69 Query 392 ELAEGE 397 E A+ E Sbjct 70 EAAKSE 75 > Hs19923531 Length=351 Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust. Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 21/164 (12%) Query 71 PVFVTWWQLAQGLLMAWCLGEVGQEYPKLAYFPRVEIDKRLLRRLFVPTIVNALMLVLAN 130 P+FVT++Q L+ L + P FP + +D R+ R + ++V M+ N Sbjct 60 PIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNN 119 Query 131 VLLYRVQCIATLPVVVAFAVVLHHVTRFVGCGEEYMPMRWQ-------AIGLLFTAFLLG 183 + L V VAF V +T Y+ ++ G++ F LG Sbjct 120 LCLKYVG--------VAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLG 171 Query 184 ITDSKTVGSEVLPW-ALLYAIFSA---AFRAAFLQKVMHEVEGK 223 + G+ L W ++ + ++ + A + KV+ V+G Sbjct 172 VDQEGAEGT--LSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGS 213 Lambda K H 0.327 0.141 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 10140246140 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40