bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_3355_orf2
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
SPBC14C8.12 97.4 1e-20
YOR224c 88.2 8e-18
Hs14589953 87.4 2e-17
7296484 84.3 1e-16
CE04448 82.0 6e-16
At1g54250 80.9 1e-15
At3g59600 80.5 2e-15
ECU07g0840 29.6 3.4
> SPBC14C8.12
Length=125
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 83/136 (61%), Gaps = 11/136 (8%)
Query 38 MSIPCLFEDRFTVRNVDNGKFERVSRIRAKSSGLDADLILDVHNQLLPVAEKQGLHIGLT 97
MS L ++ FTV +VD K++RVSRI A S D +L LD+++Q+ P+ + + +T
Sbjct 1 MSESVLLDEIFTVTSVDKQKYQRVSRITAVSGQNDMNLTLDINSQIYPLEKDATFSLQIT 60
Query 98 NSLSGPDRKGDGAADSQVLSGYDYVMYGKVFKLEETSSERRTLYLSFGGLLMSLAADKHV 157
++L+ PD K DY+MYGKV+++EE E+ ++Y+SFGGLLM++
Sbjct 61 SNLNSPDLK----------EAADYIMYGKVYRVEEAKDEKVSVYVSFGGLLMAIEGSHRK 110
Query 158 VGDLELDMRVYLLVKR 173
+ L LD VYLL++R
Sbjct 111 LYRLSLD-HVYLLLRR 125
> YOR224c
Length=146
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Query 43 LFEDRFTVRNVDNGKFERVSRIRAKSSGLD-ADLILDVHNQLLPVAEKQGLHIGLTNSLS 101
LF+D F V VD G++ +V RI A S+ D L LD++ +L PVA + L + + +SL+
Sbjct 5 LFDDIFQVSEVDPGRYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIASSLN 64
Query 102 GPDRKGDG-----------AADSQVLSGYDYVMYGKVFKLEETSSERRTLYLSFGGLLMS 150
D + A D + YDYVMYG +K EE S + +Y SFGGLLM
Sbjct 65 LEDTPANDSSATRSWRPPQAGDRSLADDYDYVMYGTAYKFEEVSKDLIAVYYSFGGLLMR 124
Query 151 LAADKHVVGDLELDMRVYLLVKR 173
L + + +L+ + YLL++R
Sbjct 125 LEGNYRNLNNLKQE-NAYLLIRR 146
> Hs14589953
Length=150
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Query 43 LFEDRFTVRNVD--NGKFERVSRIRAKSSGLDADLILDVHNQLLPVAEKQGLHIGLTNSL 100
LFED F V+++D KF+RVSR+ +S DLILDV+ Q+ PV + + ++L
Sbjct 5 LFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTL 64
Query 101 SGPDRKGDGAADS-----QVLSGYDYVMYGKVFKLE--ETSSE---RRTLYLSFGGLLMS 150
DG + ++YVMYGKV+++E ETS+E R + Y+S+GGLLM
Sbjct 65 YEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMR 124
Query 151 LAADKHVVGDLELDMRVYLLVKR 173
L D + + E+D RVYLL+K+
Sbjct 125 LQGDANNLHGFEVDSRVYLLMKK 147
> 7296484
Length=149
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 21/147 (14%)
Query 43 LFEDRFTVRNVD--NGKFERVSRIRAKSSGLDADLILDVHNQLLPVAEKQGLHIGLTNSL 100
LFED F V+++D KF+RVSR+ +S DLILD+++ L P+ + L +L
Sbjct 5 LFEDIFNVKDMDPEGKKFDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLVLATTL 64
Query 101 SGPDRKGDGAADSQVLS----------GYDYVMYGKVFKLE----ETSSERRTLYLSFGG 146
+ DG DS + ++YVMYGK++++E + R + Y+SFGG
Sbjct 65 -----REDGCPDSGEYNPMEHEGTRADSFEYVMYGKIYRIEGDEAHNEASRLSAYVSFGG 119
Query 147 LLMSLAADKHVVGDLELDMRVYLLVKR 173
LLM L D + + E+D +YLL+KR
Sbjct 120 LLMRLQGDANNLHGFEVDQHMYLLMKR 146
> CE04448
Length=148
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 10/142 (7%)
Query 43 LFEDRFTVRNVD--NGKFERVSRIRAKSSGLDADLILDVHNQLLPVAEKQGLHIGLTNSL 100
+F+D F V++VD KF+RVSR + +LI+D+++Q+ P+ + + + L +L
Sbjct 5 IFDDMFKVKSVDPDGKKFDRVSRYFCDAESFKMELIIDINSQIYPLKQNDKVRLVLATTL 64
Query 101 SGPDRKGDGAADSQV----LSGYDYVMYGKVFKLEE----TSSERRTLYLSFGGLLMSLA 152
+G D + + Y+YVMYGKV++LE+ T + Y SFGGLLM L
Sbjct 65 REDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDDTGTDGGKLAAYASFGGLLMRLK 124
Query 153 ADKHVVGDLELDMRVYLLVKRS 174
+ + E+DM +YLL+K++
Sbjct 125 GEAINLHGFEVDMNLYLLMKKT 146
> At1g54250
Length=146
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query 42 CLFEDRFTVRNVD--NGKFERVSRIRAKSSGLDADLILDVHNQLLPVA--EKQGLHIGLT 97
LFED F V +D KF++V+R++A S L+ + LDV+ ++ P+A +K L + T
Sbjct 6 ILFEDIFVVDQLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAPT 65
Query 98 NSLSGPDRKG--DGAADSQVLSGYDYVMYGKVFKLEET--SSERRTLYLSFGGLLMSLAA 153
+L G G A + Y+Y+M+GK++K+ E + + LY+SFGGLLM L
Sbjct 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISERDGKTPKAELYVSFGGLLMLLKG 125
Query 154 DKHVVGDLELDMRVYLLVKR 173
D + ELD R++LL+++
Sbjct 126 DPAHISHFELDQRLFLLMRK 145
> At3g59600
Length=146
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query 42 CLFEDRFTVRNVD--NGKFERVSRIRAKSSGLDADLILDVHNQLLPVA--EKQGLHIGLT 97
+FED F V +D KF++V+R+ A+S L+ + LDV+ ++ P+A +K L + T
Sbjct 6 IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAPT 65
Query 98 NSLSGPDRKG--DGAADSQVLSGYDYVMYGKVFKLEET--SSERRTLYLSFGGLLMSLAA 153
+L G G A + Y+Y+M+GK++K+ E + + LY+SFGGLLM L
Sbjct 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISERDGKTPKAELYVSFGGLLMLLQG 125
Query 154 DKHVVGDLELDMRVYLLVKR 173
D + ELD R++LL+++
Sbjct 126 DPAHISHFELDQRLFLLMRK 145
> ECU07g0840
Length=120
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query 43 LFEDRFTVRNVD-NGK-FERVSRIRAKSSGLDADLILDVHNQLLPVAEKQGLHIGLTNSL 100
+ D F V ++D GK + VSR KS +D + LD + L + L + + +
Sbjct 3 ILADNFKVSDIDREGKLYANVSRAYMKSPTVD--IALDYNTVLCRLQTGHALEVRIFRGI 60
Query 101 SGPDRKGDGAADSQVLSGYDYVMYGKVFKLEETSSERRTLYLSFGGLLMSLAADKHVVGD 160
S D + Y++ G+V+ +E R + SFGGLL+S+ A + V D
Sbjct 61 S---------EDIEC----HYLVCGRVYSVEYKGG-RALVKASFGGLLLSMDAPEEGVRD 106
Query 161 L 161
+
Sbjct 107 I 107
Lambda K H
0.319 0.136 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2806646388
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40