bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_2259_orf2 Length=369 Score E Sequences producing significant alignments: (Bits) Value YBL020w 34.7 0.37 CE04040 33.1 0.95 Hs15721937 31.2 3.6 SPBC887.19 30.8 4.3 At5g07630 30.0 8.4 > YBL020w Length=574 Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust. Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 21/112 (18%) Query 270 CVFGPSTVA-----------SSSGCVLTLQVYCCYVGCLSLFGLLDAYAAATSSGTSL-- 316 VFGP+ + S++ + T++VYC Y+ LSL G+ +A+ + ++G + Sbjct 382 IVFGPANSSFLLQFLIGSKWSTTSVLDTIRVYCFYIPFLSLNGIFEAFFQSVATGDQILK 441 Query 317 -ELLQRCYSGATAAHLILMPLSVRFAVVYGVPSGAGAAAAQVVGTIIRISCC 367 +SG + L+ ++ ++ G + ++ ++RI C Sbjct 442 HSYFMMAFSGIFLLNSWLLIEKLKLSI-------EGLILSNIINMVLRILYC 486 > CE04040 Length=321 Score = 33.1 bits (74), Expect = 0.95, Method: Compositional matrix adjust. Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 0/43 (0%) Query 120 RLFPSSSMAECKKQHVPAAGKQVEKEPFCTRRKTCSPKSQKGE 162 RLF ++M + +P K + + C+RR TC+P +++ E Sbjct 55 RLFALNAMVKANSHTLPPRSKNISAKNLCSRRMTCAPHNRRYE 97 > Hs15721937 Length=167 Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 4/86 (4%) Query 133 QHVPAAGKQVEKEPFCTRRKTCSPKSQKGEREQHIDYRHQNELAQFYCVERKELLESDSN 192 + +P A + + P C + + + KG++ + H A Y RK L + Sbjct 19 RELPCAWRALHTSPVCAKNRAARVRVSKGDKPVTYEEAH----APHYIAHRKGWLSLHTG 74 Query 193 RRTGTDRGGAGRLESLFLGRLMTLLF 218 G D +E +FL + M F Sbjct 75 NLDGEDHAAERTVEDVFLRKFMWGTF 100 > SPBC887.19 Length=527 Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 0/65 (0%) Query 48 KLVLQNGEQLLLLLLLDSKAAAEYALVSGTASVICRVVFAPTESAAFDSFRVLQAQHSAA 107 K ++ G+++++ A YAL S S++ R+VF P E + F L + Sbjct 255 KHLITKGDKIMVAWYASPSAQGPYALASNYGSLLARIVFRPVEDHSHIVFAQLTHYKNKK 314 Query 108 DRAAA 112 D A Sbjct 315 DEKKA 319 > At5g07630 Length=401 Score = 30.0 bits (66), Expect = 8.4, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query 252 LGLASAAAGVLFAAPALRCVFGPSTVASSSGCVLTLQVYCCYVGCLSLFGLLDAYAAATS 311 +GL A G ++ +R ++G S L LQ YC Y+ L++ G +A+ A Sbjct 235 IGLIFMAFGPSYSYSLIRLLYGEK--WSDGEASLALQFYCLYIIVLAMNGTSEAFLHAVG 292 Query 312 SGTSLE 317 + LE Sbjct 293 TKNELE 298 Lambda K H 0.323 0.133 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 9085535074 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40