bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_2255_orf1 Length=110 Score E Sequences producing significant alignments: (Bits) Value At3g56930 54.7 4e-08 At5g05070 47.0 9e-06 At5g41060 45.8 2e-05 At3g48760 44.7 4e-05 At4g24630 44.3 5e-05 At3g56920 43.1 1e-04 At5g50020 40.8 6e-04 Hs14761406 37.0 0.010 Hs7705801 36.6 0.010 CE20263 33.9 0.071 7298717 33.9 0.076 7294600_1 32.3 0.23 At3g23640 31.6 0.39 SPBC3H7.09 30.8 0.67 At2g40990 29.6 1.4 CE02026 29.3 1.7 7298718 29.3 1.8 Hs13637017 28.5 2.8 > At3g56930 Length=477 Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 0/43 (0%) Query 60 QRLYESWEGENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVYY 102 +RLY+ W G N F CGGRL+ GP+ L +S +L+LGP V+++ Sbjct 9 KRLYQVWRGSNKFLCGGRLIFGPDASSLYLSTILILGPAVMFF 51 > At5g05070 Length=339 Score = 47.0 bits (110), Expect = 9e-06, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 0/41 (0%) Query 61 RLYESWEGENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVY 101 R Y++W+G N FCCGGRL+ GP+ L ++ L+ P + + Sbjct 37 RFYKAWKGNNRFCCGGRLIFGPDVSSLYLTSFLIGAPALTF 77 > At5g41060 Length=410 Score = 45.8 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 0/41 (0%) Query 61 RLYESWEGENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVY 101 R+Y++W+G NIFC GR + GP+ L +++ L++ P ++ Sbjct 19 RVYQTWKGSNIFCLQGRFIFGPDVRSLGLTISLIVAPVTIF 59 > At3g48760 Length=470 Score = 44.7 bits (104), Expect = 4e-05, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 0/41 (0%) Query 61 RLYESWEGENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVY 101 R Y+ W+G N+F GGRL+ GP+ + ++V L+ P +V+ Sbjct 28 RTYKGWKGNNVFFLGGRLVFGPDARSILITVFLITAPVIVF 68 > At4g24630 Length=374 Score = 44.3 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 30/42 (71%), Gaps = 0/42 (0%) Query 60 QRLYESWEGENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVY 101 QR+++ W+G N F GGRL+ GP+ L +++LL++ P V++ Sbjct 3 QRVFQVWKGSNKFILGGRLIFGPDARSLPLTLLLIIVPVVLF 44 > At3g56920 Length=319 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 0/43 (0%) Query 59 QQRLYESWEGENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVY 101 +QR+Y+ W +N F CGGRL+ GP+ L ++ ++ GP + + Sbjct 8 RQRIYQVWPAKNKFYCGGRLVFGPDASSLLLTTCMIGGPAIAF 50 > At5g50020 Length=414 Score = 40.8 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 0/50 (0%) Query 61 RLYESWEGENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVYYQVVMPLIR 110 R++E+W+G N F GGRL+ GP+ + + LL++ P + V +R Sbjct 4 RVFEAWKGSNKFLFGGRLIFGPDAWSIPFTFLLIITPVCFFSVFVATHLR 53 > Hs14761406 Length=382 Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust. Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Query 59 QQRLYESWE---GENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVYY 102 ++++ WE G N FCC GR+M + +++ L+LG C +++ Sbjct 25 RKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFF 71 > Hs7705801 Length=382 Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust. Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Query 59 QQRLYESWE---GENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVYY 102 ++++ WE G N FCC GR+M + +++ L+LG C +++ Sbjct 25 RKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFLILGTCTLFF 71 > CE20263 Length=368 Score = 33.9 bits (76), Expect = 0.071, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 0/51 (0%) Query 59 QQRLYESWEGENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVYYQVVMPLI 109 ++R ++S G N F CGGRL+ V+V+L++ VY+ P + Sbjct 37 KRRKWQSHPGRNRFGCGGRLVCSRSHGAFVVTVILMIATLTVYFVFDAPFL 87 > 7298717 Length=248 Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query 42 LPQLLLEVPLQRGRLFGQQRLYESWEGENIFCCGGRLMTGPEPL 85 + Q + V + RG++ Q LYE+ + IF G + T PEPL Sbjct 155 MKQTAVLVNIARGKIVNQDDLYEALKANRIFSAGLDV-TDPEPL 197 > 7294600_1 Length=260 Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Query 59 QQRLYESWE---GENIFCCGGRLMTGPEPLHLAVSVLLLLGPCVVYYQVVMPLI 109 QR+ WE G N F C G LM+ P ++ +L+ G +++ P + Sbjct 15 NQRVTRKWELFAGRNKFYCDGLLMSAPHTGVFYLTCILITGTSALFFAFDCPFL 68 > At3g23640 Length=365 Score = 31.6 bits (70), Expect = 0.39, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 23/82 (28%) Query 17 GILMAQPEVEST--GDEAHRPQLQQRTLPQLLLEVPLQRGRLFGQQRLYESWEGENIFCC 74 G+LMA+ E D+ RP + L R G QR +W G+N Sbjct 192 GMLMARSTYEGMELADKNKRPFV-------------LTRAGFIGSQRYAATWTGDN---- 234 Query 75 GGRLMTGPEPLHLAVSVLLLLG 96 ++ E LH+++S++L LG Sbjct 235 ----LSNWEHLHMSISMVLQLG 252 > SPBC3H7.09 Length=350 Score = 30.8 bits (68), Expect = 0.67, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 7/85 (8%) Query 18 ILMAQPEVESTGDEAHRPQLQQRTLPQLLLEVPLQRGRLFGQQRLYESWEGENIFCCGGR 77 + ++ P +E ++ + +++P + EVP R Y++ G NI+ C GR Sbjct 25 VTLSDPTYPMNLEEKNQIPYRFQSVPDDVPEVPHIESR-------YKNLPGNNIYLCCGR 77 Query 78 LMTGPEPLHLAVSVLLLLGPCVVYY 102 L + +S+ L+ P V+++ Sbjct 78 LQMSSQYKAFLISLFALILPGVLFF 102 > At2g40990 Length=340 Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 0/30 (0%) Query 72 FCCGGRLMTGPEPLHLAVSVLLLLGPCVVY 101 F CGGRL+ GP+ L ++ ++ GP + + Sbjct 43 FYCGGRLVFGPDASSLLLTTAMIGGPALTF 72 > CE02026 Length=401 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 10/43 (23%) Query 11 LHCPLKGILMAQPEVESTGDEAHR----------PQLQQRTLP 43 LH L+GIL+++P+ ++G +HR QL+ R LP Sbjct 32 LHPSLRGILLSRPKRWNSGSPSHRIAVNLVRKYKKQLKPRVLP 74 > 7298718 Length=598 Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query 49 VPLQRGRLFGQQRLYESWEGENIFCCGGRLMTGPEPL 85 V + RG++ Q LYE+ + IF G +M PEPL Sbjct 512 VNVGRGKIVNQDDLYEALKSNRIFAAGLDVMD-PEPL 547 > Hs13637017 Length=333 Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query 20 MAQPEVESTGDEAHRPQLQQRTLPQLLLEVPLQRGRLFGQQRLYESWEGENIFCC 74 MA+ V G R L + +L + L+ G L+GQ RLY W E +F C Sbjct 134 MAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLY-GWTMEPVFVC 187 Lambda K H 0.323 0.143 0.448 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1195973986 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40