bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_1842_orf1
Length=122
Score E
Sequences producing significant alignments: (Bits) Value
Hs13376717 33.5 0.10
7301068 33.1 0.12
7301069 31.6 0.40
At1g28510 30.4 0.88
Hs20551038 29.6 1.3
At3g58150 28.9 2.4
Hs9955970 28.9 2.5
Hs9955972 28.5 3.0
CE28501 27.7 5.1
> Hs13376717
Length=179
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
Query 86 FPAAKLLSVALRQLSRPVAAWLQRAAADSPRFK 118
FP AKLL + +RQ+S+P+A ++ AA S FK
Sbjct 6 FPMAKLLYLGIRQVSKPLANRIKEAARRSEFFK 38
> 7301068
Length=255
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
Query 86 FPAAKLLSVALRQLSRPVAAWLQRAAADSPRFK 118
FPAAKL +A++Q+S+P+A ++ A SP F+
Sbjct 6 FPAAKLGILAIKQVSKPIANVIKSNAKSSPFFR 38
> 7301069
Length=166
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 0/37 (0%)
Query 86 FPAAKLLSVALRQLSRPVAAWLQRAAADSPRFKLACV 122
FP AKL +A++ +S+P+ +++ A + FK V
Sbjct 6 FPLAKLALLAIKHISKPIGNLIKQTAKKNKSFKTLVV 42
> At1g28510
Length=171
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 0/39 (0%)
Query 84 MPFPAAKLLSVALRQLSRPVAAWLQRAAADSPRFKLACV 122
M P KL ++A++ +S+P+A+ L+ A P+F+ + +
Sbjct 1 MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSII 39
> Hs20551038
Length=626
Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query 42 SASRTRLGARVRPRKAREAPERNPVLGFGAKPCFRVWR 79
S S+++L AR + R+ARE PE P++ GA+ RV R
Sbjct 37 SGSKSKLRAREKRRQAREEPE--PLM--GAQATARVGR 70
> At3g58150
Length=183
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 0/39 (0%)
Query 84 MPFPAAKLLSVALRQLSRPVAAWLQRAAADSPRFKLACV 122
M P KL ++ALR + +P+A L++ A +P+F+ +
Sbjct 1 MVLPLLKLGTLALRTICKPIANQLKKEAGVNPKFRQFII 39
> Hs9955970
Length=1527
Score = 28.9 bits (63), Expect = 2.5, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query 48 LGARVRPRKAREAPERNPVLG--FGAKPCFRVWRGGPAMPFPAAKLLSVALRQLSRPVA- 104
LGAR RPRK G F CF++ + + F +LLS+ +R +S P+A
Sbjct 288 LGARPRPRKPSFLKALLATFGSSFLISACFKLIQD--LLSFINPQLLSILIRFISNPMAP 345
Query 105 AW 106
+W
Sbjct 346 SW 347
> Hs9955972
Length=1238
Score = 28.5 bits (62), Expect = 3.0, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query 48 LGARVRPRKAREAPERNPVLG--FGAKPCFRVWRGGPAMPFPAAKLLSVALRQLSRPVA- 104
LGAR RPRK G F CF++ + + F +LLS+ +R +S P+A
Sbjct 288 LGARPRPRKPSFLKALLATFGSSFLISACFKLIQD--LLSFINPQLLSILIRFISNPMAP 345
Query 105 AW 106
+W
Sbjct 346 SW 347
> CE28501
Length=524
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query 55 RKAREAPERNPVLG---FGAKPCFRVWRGGPA 83
R+ R+APER+P G G+ P R RGGP
Sbjct 340 RQKRQAPERSPPTGSPPTGSPPTGRPPRGGPG 371
Lambda K H
0.331 0.139 0.504
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1194805952
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40