bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_1842_orf1 Length=122 Score E Sequences producing significant alignments: (Bits) Value Hs13376717 33.5 0.10 7301068 33.1 0.12 7301069 31.6 0.40 At1g28510 30.4 0.88 Hs20551038 29.6 1.3 At3g58150 28.9 2.4 Hs9955970 28.9 2.5 Hs9955972 28.5 3.0 CE28501 27.7 5.1 > Hs13376717 Length=179 Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust. Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 0/33 (0%) Query 86 FPAAKLLSVALRQLSRPVAAWLQRAAADSPRFK 118 FP AKLL + +RQ+S+P+A ++ AA S FK Sbjct 6 FPMAKLLYLGIRQVSKPLANRIKEAARRSEFFK 38 > 7301068 Length=255 Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 0/33 (0%) Query 86 FPAAKLLSVALRQLSRPVAAWLQRAAADSPRFK 118 FPAAKL +A++Q+S+P+A ++ A SP F+ Sbjct 6 FPAAKLGILAIKQVSKPIANVIKSNAKSSPFFR 38 > 7301069 Length=166 Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 0/37 (0%) Query 86 FPAAKLLSVALRQLSRPVAAWLQRAAADSPRFKLACV 122 FP AKL +A++ +S+P+ +++ A + FK V Sbjct 6 FPLAKLALLAIKHISKPIGNLIKQTAKKNKSFKTLVV 42 > At1g28510 Length=171 Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust. Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 0/39 (0%) Query 84 MPFPAAKLLSVALRQLSRPVAAWLQRAAADSPRFKLACV 122 M P KL ++A++ +S+P+A+ L+ A P+F+ + + Sbjct 1 MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSII 39 > Hs20551038 Length=626 Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 4/38 (10%) Query 42 SASRTRLGARVRPRKAREAPERNPVLGFGAKPCFRVWR 79 S S+++L AR + R+ARE PE P++ GA+ RV R Sbjct 37 SGSKSKLRAREKRRQAREEPE--PLM--GAQATARVGR 70 > At3g58150 Length=183 Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 0/39 (0%) Query 84 MPFPAAKLLSVALRQLSRPVAAWLQRAAADSPRFKLACV 122 M P KL ++ALR + +P+A L++ A +P+F+ + Sbjct 1 MVLPLLKLGTLALRTICKPIANQLKKEAGVNPKFRQFII 39 > Hs9955970 Length=1527 Score = 28.9 bits (63), Expect = 2.5, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query 48 LGARVRPRKAREAPERNPVLG--FGAKPCFRVWRGGPAMPFPAAKLLSVALRQLSRPVA- 104 LGAR RPRK G F CF++ + + F +LLS+ +R +S P+A Sbjct 288 LGARPRPRKPSFLKALLATFGSSFLISACFKLIQD--LLSFINPQLLSILIRFISNPMAP 345 Query 105 AW 106 +W Sbjct 346 SW 347 > Hs9955972 Length=1238 Score = 28.5 bits (62), Expect = 3.0, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%) Query 48 LGARVRPRKAREAPERNPVLG--FGAKPCFRVWRGGPAMPFPAAKLLSVALRQLSRPVA- 104 LGAR RPRK G F CF++ + + F +LLS+ +R +S P+A Sbjct 288 LGARPRPRKPSFLKALLATFGSSFLISACFKLIQD--LLSFINPQLLSILIRFISNPMAP 345 Query 105 AW 106 +W Sbjct 346 SW 347 > CE28501 Length=524 Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Query 55 RKAREAPERNPVLG---FGAKPCFRVWRGGPA 83 R+ R+APER+P G G+ P R RGGP Sbjct 340 RQKRQAPERSPPTGSPPTGSPPTGRPPRGGPG 371 Lambda K H 0.331 0.139 0.504 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1194805952 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40