bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_1686_orf1 Length=131 Score E Sequences producing significant alignments: (Bits) Value At1g60420 60.1 1e-09 At4g31240 56.2 2e-08 At4g31250_2 48.5 3e-06 CE13792 44.7 4e-05 Hs19923987 44.7 5e-05 CE02290 42.7 2e-04 CE15865 39.3 0.002 Hs11968007 38.1 0.004 CE16903 34.7 0.053 Hs21699084 33.1 0.15 CE01848 31.2 0.52 CE04323 29.6 1.7 Hs7949163 27.3 7.5 At3g61400 27.3 8.7 > At1g60420 Length=578 Score = 60.1 bits (144), Expect = 1e-09, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%) Query 1 PHCRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFACTMPWLSLPFGD- 59 P CR F+ +L +VY Q+K+ + FE I+I DR F + MPWL+LPFGD Sbjct 376 PPCRAFTPKLVEVYKQIKE-----RNEAFELIFISSDRDQESFDEYYSQMPWLALPFGDP 430 Query 60 -YCALVRRFGIRRLPSIILITPDDHILTSDA 89 +L + F + +P + + P +T +A Sbjct 431 RKASLAKTFKVGGIPMLAALGPTGQTVTKEA 461 Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 7/95 (7%) Query 3 CRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFACTMPWLSLPFGDYCA 62 C + + +L + Y++LK+ + + FE + I + F T PWL+LPF D Sbjct 218 CTELTPKLVEFYTKLKENKED-----FEIVLISLEDDEESFNQDFKTKPWLALPFNDKSG 272 Query 63 --LVRRFGIRRLPSIILITPDDHILTSDAVPIFDD 95 L R F + LP+++++ PD S+ DD Sbjct 273 SKLARHFMLSTLPTLVILGPDGKTRHSNVAEAIDD 307 Score = 45.4 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 11/84 (13%) Query 3 CRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFACTMPWLSLPFGDYCA 62 C+ F+ +L +VY++L G FE +++ D F + MPWL++PF D Sbjct 58 CQRFTPQLVEVYNELSSKVG------FEIVFVSGDEDEESFGDYFRKMPWLAVPFTDSET 111 Query 63 ---LVRRFGIRRLPSIILITPDDH 83 L F +R +P+++++ DDH Sbjct 112 RDRLDELFKVRGIPNLVMV--DDH 133 > At4g31240 Length=204 Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Query 4 RDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFACTMPWLSLPFGDYCA- 62 R F+++L VY++L FE I I DR EF MPWL++P+ D Sbjct 31 RSFTSQLVDVYNEL----ATTDKGSFEVILISTDRDSREFNINMTNMPWLAIPYEDRTRQ 86 Query 63 -LVRRFGIRRLPSIILITPDDHILTSDA 89 L R F ++ +P++++I P++ +T++A Sbjct 87 DLCRIFNVKLIPALVIIGPEEKTVTTNA 114 > At4g31250_2 Length=281 Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Query 3 CRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFACTMPWLSLPFGDYC- 61 C+DF+ L ++Y L+ +GE+ E I++ D F MPWL++PF Sbjct 138 CKDFTPELIKLYENLQN-RGEE----LEIIFVSFDHDMTSFYEHFWCMPWLAVPFNLSLL 192 Query 62 -ALVRRFGIRRLPSIILITPDDHILTSDAVPIFDD 95 L ++GI R+PS++ + D+ + D + + +D Sbjct 193 NKLRDKYGISRIPSLVPLYSDEISVAEDVIGLIED 227 > CE13792 Length=155 Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 12/93 (12%) Query 1 PHCRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFA--CTMPWLSLPFG 58 P CR F+ L Y ++ + FE +++ DRS ++ + C W +P G Sbjct 52 PPCRGFTPILKDFYEEVNE--------EFEIVFVSSDRSESDLKMYMKECHGDWYHIPHG 103 Query 59 DYCA--LVRRFGIRRLPSIILITPDDHILTSDA 89 + L ++G+ +P++I++ PD +T D Sbjct 104 NGAKQKLSTKYGVSGIPALIIVKPDGTEITRDG 136 > Hs19923987 Length=212 Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 11/93 (11%) Query 1 PHCRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFACTMP--WLSLPFG 58 P +DF RL + L+ Q +Y+ D + + F MP WL LPF Sbjct 52 PILKDFFVRLTDEFYVLRAAQ-------LALVYVSQDSTEEQQDLFLKDMPKKWLFLPFE 104 Query 59 DYCA--LVRRFGIRRLPSIILITPDDHILTSDA 89 D L R+F + RLP+++++ PD +LT D Sbjct 105 DDLRRDLGRQFSVERLPAVVVLKPDGDVLTRDG 137 > CE02290 Length=149 Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/100 (21%), Positives = 50/100 (50%), Gaps = 9/100 (9%) Query 1 PHCRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAF--ACTMPWLSLPFG 58 P CR F+ +L + + +++ ++ P FE +++ DR + + W ++PFG Sbjct 39 PPCRQFTPKLTRFFDEIR-----KKHPEFEVVFVSRDREDGDLREYFLEHMGAWTAIPFG 93 Query 59 D--YCALVRRFGIRRLPSIILITPDDHILTSDAVPIFDDR 96 L+ ++ ++ +PS+ ++ P+ ++ DA D+ Sbjct 94 TPRIQELLEQYEVKTIPSMRIVKPNGDVVVQDARTEIQDK 133 > CE15865 Length=777 Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 10/91 (10%) Query 1 PHCRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFACTM--PWLSLPFG 58 P RDF+ L Q YSQ++ FE +++ D + E + W LP Sbjct 672 PPSRDFTPVLAQFYSQVED--------NFEILFVSSDNNTQEMNFYLQNFHGDWFHLPLN 723 Query 59 DYCALVRRFGIRRLPSIILITPDDHILTSDA 89 ++ R +P++I++ PD ++T D Sbjct 724 LCNSMKHRNTKNHIPALIIMKPDGTVITDDG 754 > Hs11968007 Length=186 Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Query 50 MPWLSLPFGDYC---ALVRRFGIRRLPSIILITPDDHILTSDA-VPIFDDRD 97 MPWL++P+ D L R +GI+ +P++I++ P ++T V + +D D Sbjct 1 MPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEVITRQGRVEVLNDED 52 > CE16903 Length=151 Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 19/107 (17%) Query 3 CRDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAF-ACTMPWLSLPFGD-- 59 CR F+ +L + Y LK E E + + DR + + W+++PFGD Sbjct 42 CRQFTPKLKRFYEALKAAGKE-----IEVVLVSRDREAEDLLEYLGHGGDWVAIPFGDER 96 Query 60 YCALVRRFGIRRLPSIILITPDDHIL-----------TSDAVPIFDD 95 ++++ + +P+ LI +L DAV +FD+ Sbjct 97 IQEYLKKYEVPTIPAFKLINNAGELLHDARADVTERGKDDAVALFDE 143 > Hs21699084 Length=135 Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query 4 RDFSARLHQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAFACTM--PWLSLPFGD 59 RDF+ L Y+ L + ++P PFE +++ D S E F + WL+LPF D Sbjct 42 RDFTPLLCDFYTAL--VAEARRPAPFEVVFVSADGSCQEMLDFMRELHGAWLALPFHD 97 > CE01848 Length=140 Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust. Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query 37 DRSPAEFAAFACTMP-WLSLPFGDYC--ALVRRFGIRRLPSIILITPDDHILTSDA 89 DRS ++ + W +P+G+ L ++G+ +P++I++ PD +T D Sbjct 66 DRSESDLKMYMSEHGDWYHIPYGNDAIKELSTKYGVSGIPALIIVKPDGTEVTKDG 121 > CE04323 Length=283 Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Query 5 DFSARLHQVYSQLKQ--LQGEQQPPPFETIYIPCDRSPAEFAAFA 47 DFS LH SQL G +Q P FET++ P PA +A A Sbjct 10 DFSQPLHYALSQLNADLYAGIEQEPHFETVHFP---KPASLSAMA 51 > Hs7949163 Length=391 Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust. Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 0/28 (0%) Query 73 PSIILITPDDHILTSDAVPIFDDRDAAQ 100 P + + P+DH L S P+ DD D +Q Sbjct 332 PCYMDVIPEDHRLESPTTPLLDDMDGSQ 359 > At3g61400 Length=370 Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 6/36 (16%) Query 11 HQVYSQLKQLQGEQQPPPFETIYIPCDRSPAEFAAF 46 H+VY +K+L EQ PP + D + +EFA+ Sbjct 325 HRVYGPIKELLSEQNPPKYR------DTTISEFASM 354 Lambda K H 0.326 0.142 0.455 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1283105810 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40