bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_1470_orf1 Length=147 Score E Sequences producing significant alignments: (Bits) Value At1g16700 36.6 0.017 At1g79010 35.8 0.034 7300064 34.7 0.062 Hs4505371 34.3 0.088 CE00832 33.1 0.18 CE02456 31.6 0.63 CE17243 27.3 9.8 > At1g16700 Length=222 Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust. Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%) Query 19 ENEKAEKVTDKLSFGDASSSNSSGNSFYSSRAVR-LRRTCH-----KATIHIPFQSQPKK 72 ++E+AE++ ++S ++ S N+ + + VR L T K TI+ PF+ P Sbjct 45 DDEEAEQLAKEISKDWSTVFERSMNTLFLTEMVRGLSLTLKYFFDPKVTINYPFEKGPLS 104 Query 73 ESARGRSSSKQTPSPQESSSNNKSCNSASPRAAV 106 RG + ++ P+ +E K C + P A+ Sbjct 105 PRFRGEHALRRYPTGEERCIACKLCEAVCPAQAI 138 > At1g79010 Length=222 Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust. Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%) Query 19 ENEKAEKVTDKLSFGDASSSNSSGNSFYSSRAVR-LRRTCH-----KATIHIPFQSQPKK 72 ++E+AE+++ ++S + S N+ + + VR L T K TI+ PF+ P Sbjct 45 DDEEAEQLSKEISKDWNTVFERSINTLFLTEMVRGLSLTLKYFFDPKVTINYPFEKGPLS 104 Query 73 ESARGRSSSKQTPSPQESSSNNKSCNSASPRAAV 106 RG + ++ P+ +E K C + P A+ Sbjct 105 PRFRGEHALRRYPTGEERCIACKLCEAVCPAQAI 138 > 7300064 Length=217 Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 0/62 (0%) Query 60 ATIHIPFQSQPKKESARGRSSSKQTPSPQESSSNNKSCNSASPRAAVDEVRESTAEMQRR 119 ATI+ PF+ P RG + ++ PS +E K C + P A+ E A+ RR Sbjct 87 ATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERADGSRR 146 Query 120 SS 121 ++ Sbjct 147 TT 148 > Hs4505371 Length=210 Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 0/62 (0%) Query 60 ATIHIPFQSQPKKESARGRSSSKQTPSPQESSSNNKSCNSASPRAAVDEVRESTAEMQRR 119 ATI+ PF+ P RG + ++ PS +E K C + P A+ E A+ RR Sbjct 80 ATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRR 139 Query 120 SS 121 ++ Sbjct 140 TT 141 > CE00832 Length=212 Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 0/62 (0%) Query 60 ATIHIPFQSQPKKESARGRSSSKQTPSPQESSSNNKSCNSASPRAAVDEVRESTAEMQRR 119 ATI+ PF+ P RG + ++ PS +E K C + P A+ E+ + RR Sbjct 82 ATINYPFEKGPLSSRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAETRPDGSRR 141 Query 120 SS 121 ++ Sbjct 142 TT 143 > CE02456 Length=479 Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 0/50 (0%) Query 10 DDLKDSNRTENEKAEKVTDKLSFGDASSSNSSGNSFYSSRAVRLRRTCHK 59 D L DS R+E +K EK+ + + G + NSF S +R+ C K Sbjct 77 DALIDSLRSEIDKLEKINKEFANGSVIPEHDDSNSFGESEMLRISEDCQK 126 > CE17243 Length=553 Score = 27.3 bits (59), Expect = 9.8, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query 8 EGDDLKDSNRTENEKAEKVTDKLSFG---DASSSNSSGNSFYSSRAVRLR 54 E D+ KDSN E+E E T +L G D S N +YS +R+R Sbjct 443 EDDEEKDSNSDEDEDEESTTVELVEGETPDPSEQNFLQRIYYSPDYLRVR 492 Lambda K H 0.299 0.113 0.295 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1785281974 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40