bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_1428_orf1 Length=190 Score E Sequences producing significant alignments: (Bits) Value At5g18140 36.2 0.043 Hs4504511 35.0 0.10 7299759 31.2 1.3 YER048c 30.8 1.7 Hs19923086 30.4 2.1 CE17461 29.3 4.9 CE09922 29.3 5.4 7290725 28.5 7.7 7302023 28.5 7.8 7302561 28.1 9.8 > At5g18140 Length=333 Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 4/61 (6%) Query 129 RAYSSSSSSSATATTATGGGSHYETLGVKPNATQAEIRQARRDTKALKAERHEFDAGTDR 188 R+ ++ +S++ ++++ TGG +HY LG+ NATQ +I++A R L A + D D Sbjct 57 RSKTTITSAAFSSSSNTGGQNHYAVLGIARNATQGDIKRAYR----LLARKFHPDVNKDS 112 Query 189 R 189 + Sbjct 113 K 113 > Hs4504511 Length=397 Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%) Query 149 SHYETLGVKPNATQAEIRQARRDTKALK 176 ++Y+ LGVKPNATQ E+++A R ALK Sbjct 6 TYYDVLGVKPNATQEELKKAYRKL-ALK 32 > 7299759 Length=403 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%) Query 150 HYETLGVKPNATQAEIRQARRDTKALK 176 +Y+ LGVKPNAT E+++A R ALK Sbjct 7 YYDILGVKPNATPDELKKAYRKL-ALK 32 > YER048c Length=391 Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 0/22 (0%) Query 149 SHYETLGVKPNATQAEIRQARR 170 +Y+ LG+KP AT EI++A R Sbjct 6 EYYDILGIKPEATPTEIKKAYR 27 > Hs19923086 Length=212 Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Query 14 GGIQDLGSDFHRHVRCYCSSGCDRNIHSRIGRRGFDKGYNW 54 GG QD+ S R +CS C +N+H + G+++G +W Sbjct 129 GGSQDMSSAVKR----FCSVSCLQNLHVLESKDGWERGRSW 165 > CE17461 Length=374 Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Query 94 DLTMSSSLCRREGVWW-FSACSARRLFVVGASC-----SVFRAYSSSSSSSATATTATGG 147 DLT S+ R + FS + R LF + C V R SS T Sbjct 41 DLTRVCSISRFSAFFIQFSLINVRCLFTKFSFCFHLLVGVVRCNMFGGGSSGPVDTTL-- 98 Query 148 GSHYETLGVKPNATQAEIRQA 168 Y TL V+P+A+QA+I+++ Sbjct 99 ---YTTLNVRPDASQADIKKS 116 > CE09922 Length=739 Score = 29.3 bits (64), Expect = 5.4, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 0/47 (0%) Query 36 DRNIHSRIGRRGFDKGYNWSLSSSNYSTGIGSHHALSYRRSSNSNVI 82 D + S G DK YN S Y +GIG + L Y S S VI Sbjct 413 DVQVGSVDGLTTLDKKYNKDTKSDAYLSGIGRYLNLKYTGSKTSEVI 459 > 7290725 Length=2951 Score = 28.5 bits (62), Expect = 7.7, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%) Query 129 RAYSSSSSSSATATTATGGGSHYET--LGVKPNAT-QAEIRQARRDTKA 174 RA+++S SS+ A + T GSH++T V N T + E+R+ D++A Sbjct 713 RAFAASLRSSSPADSTTSVGSHHQTPRSSVSSNRTFRREMREGSHDSQA 761 > 7302023 Length=901 Score = 28.5 bits (62), Expect = 7.8, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query 50 KGYNWSLSSSNYSTGIGSH-HALSYRRSSNSNVIGGGGSEGGSTSDLTMSSSLCRREGVW 108 +G+N +S + G SH HA+ + +N I EGG+ L ++ S+ E V Sbjct 568 QGHNVRISGEDVGRGTFSHRHAMLVDQQTNEMFIPLNSMEGGNGGKLELAHSILSEEAVL 627 Query 109 WF 110 F Sbjct 628 GF 629 > 7302561 Length=298 Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust. Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 14/90 (15%) Query 75 RSSNSNVIGGGGSEGGSTSDLTMSSSLCRREGVWWFSACSARRLFVVGASCSVFRAYSSS 134 R ++ ++GG G+ T T+SSSL RR+ + + + ++ Sbjct 100 RGYDNALLGGSGAGAKETKGKTVSSSLVRRQALGSGGGVAGAAM--------------TT 145 Query 135 SSSSATATTATGGGSHYETLGVKPNATQAE 164 ++ S A+ A +E L + PN T E Sbjct 146 TTMSPMASAAQMAAKSFEELAIFPNGTVNE 175 Lambda K H 0.316 0.128 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 3166472848 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40