bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_1378_orf3 Length=259 Score E Sequences producing significant alignments: (Bits) Value SPCC825.05c 115 1e-25 At2g29210 109 6e-24 Hs5032119 104 2e-22 CE23686 94.4 2e-19 7298845 31.2 2.4 > SPCC825.05c Length=301 Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 12/168 (7%) Query 3 EQTPFFKDKDSQLIAQRKWPAIFDQEVDMSKVNVEVMKAWINHKITELLGFEDDIVISYC 62 EQ F D +L+ K+PA +D +VDM KVN+EV+K WI ++ EL+GFED++VI++ Sbjct 11 EQETLFTTADKKLMRSTKFPASYDTKVDMKKVNIEVLKPWIATRLNELIGFEDEVVINFV 70 Query 63 LSQLVPEEALAADV---DERKNYLCPKKLAISLTGFVGKQATHFVRELWKLLLSAQNTPT 119 L EEA+ A + ++ L P+K+ ++LTGF+ AT F ELW L++SA Sbjct 71 YGML--EEAVEASKTSDSQNESTLDPRKVQLNLTGFLESNATAFTEELWSLIISASQNQY 128 Query 120 GIPPEFLENRRLEM-------ERKREEAARINEELVRRHEQMMATEFN 160 GIP +F+ ++ E+ E +EE+ + + RR + +T ++ Sbjct 129 GIPEKFILEKKEEISKLKDRTEASKEESKTVTDHSNRRESRRESTYYD 176 > At2g29210 Length=891 Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 54/141 (38%), Positives = 86/141 (60%), Gaps = 12/141 (8%) Query 3 EQTPFFKDKDSQLIAQRKWPAIFDQEVDMSKVNVEVMKAWINHKITELLGFEDDIVISYC 62 EQ F +K ++L+ +K+ + VD++KV ++VMK WI ++TELLG ED+++I++ Sbjct 32 EQDTRFSNKQAKLMKSQKFAPELENLVDITKVKMDVMKPWIATRVTELLGIEDEVLINFI 91 Query 63 LSQLVPEEALAADVDERKNYLCPKKLAISLTGFVGKQATHFVRELWKLLLSAQNTPTGIP 122 L + K++ I+LTGF+ K F++ELW LLLSAQN P+G+P Sbjct 92 YGLL------------DGKVVNGKEIQITLTGFMEKNTGKFMKELWTLLLSAQNNPSGVP 139 Query 123 PEFLENRRLEMERKREEAARI 143 +FL+ R E ++K+EEA I Sbjct 140 QQFLDARAAETKKKQEEANEI 160 > Hs5032119 Length=820 Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/121 (44%), Positives = 78/121 (64%), Gaps = 13/121 (10%) Query 24 IFDQEVDMSKVNVEVMKAWINHKITELLGFEDDIVISYCLSQLVPEEALAADVDERKNYL 83 +++VDMSKVN+EV+K WI ++TE+LGFEDD+VI + +QL E KN Sbjct 33 CLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQL-----------EVKNPD 81 Query 84 CPKKLAISLTGFV-GKQATHFVRELWKLLLSAQNTPTGIPPEFLENRRLEMERKREEAAR 142 K + I+LTGF+ GK A F+ ELW LLLSAQ GIP FLE ++ E+++++ E + Sbjct 82 S-KMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEK 140 Query 143 I 143 + Sbjct 141 L 141 > CE23686 Length=335 Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 13/133 (9%) Query 3 EQTPFFKDKDSQLIAQRKWPAIFDQEVDMSKVNVEVMKAWINHKITELLGFEDDIVISYC 62 EQ F DK+ +L+ K+ +Q++D+++ N++V+K WI ++ ++LG EDD+V+ Y Sbjct 12 EQDGRFSDKEKKLLKTMKFEPQLEQKIDLNRCNMDVIKPWITARVNDILGMEDDVVVEYI 71 Query 63 LSQLVPEEALAADVDERKNYLCPKKLAISLTGFV-GKQATHFVRELWKLLLSAQNTPTGI 121 LSQ+ + KN L PK L I++TGF+ ++A FV +LW LL+ A + GI Sbjct 72 LSQI-----------DDKN-LNPKLLQINVTGFLNARRAREFVGDLWNLLIEANASEDGI 119 Query 122 PPEFLENRRLEME 134 P + + EM+ Sbjct 120 PASLVNQKMAEMK 132 > 7298845 Length=891 Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 7/92 (7%) Query 128 NRRLEMERKREEAARINEELV---RRHEQMMATEFNKQIKQFATGTAPPKPPTLVAYDTI 184 N R E+E R+E R+ +ELV R + M E N+ I + AP P+ D + Sbjct 560 NYRDEIELLRKENKRLEQELVKIGRENNSKMLQEINRNIARL----APKVLPSATMSDIL 615 Query 185 PDTGGGMRGWDNDDAPAARGRAASHERSRSRS 216 + G + D A+ R A + R S S Sbjct 616 DENGRRTQSLDGTAGKPAKQREAQNRRQSSGS 647 Lambda K H 0.316 0.131 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 5436237798 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40