bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_1361_orf1 Length=91 Score E Sequences producing significant alignments: (Bits) Value At1g61780 72.8 1e-13 Hs7661798 57.8 5e-09 CE05370_2 53.9 8e-08 7297565 52.0 3e-07 YNL041c 28.5 3.2 Hs4503545 28.1 4.3 YDR265w 28.1 4.6 Hs9966867 27.3 6.9 7293708_2 27.3 7.2 > At1g61780 Length=98 Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 8/98 (8%) Query 2 MPCDKCEAKFTKLVTPD--------VKEGSKRIVGVNKLIEKATKKDKLVIVGSKCKICK 53 M CDKCE K +K++ PD V EG R + NKL+ K + +KC ICK Sbjct 1 MVCDKCEKKLSKVIVPDKWKDGARNVTEGGGRKINENKLLSKKNRWSPYSTCTTKCMICK 60 Query 54 TALHMKGKYCAPCAHVNGRCWMCGKRIVDVSKHNMSLV 91 +H GKYC CA+ G C MCGK+++D + S V Sbjct 61 QQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKMYKQSNV 98 > Hs7661798 Length=101 Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 11/101 (10%) Query 2 MPCDKCEAKFTKLVTPDV-KEGSKRIV--GVNKLIEK---ATKKDKLVIVG----SKCKI 51 M C+KCE K ++TPD K+G++ G KL E +KK + G S C+I Sbjct 1 MVCEKCEKKLGTVITPDTWKDGARNTTESGGRKLNENKALTSKKARFDPYGKNKFSTCRI 60 Query 52 CKTALHMKGK-YCAPCAHVNGRCWMCGKRIVDVSKHNMSLV 91 CK+++H G YC CA+ G C MCGK+++D + + V Sbjct 61 CKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSV 101 > CE05370_2 Length=99 Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 15/94 (15%) Query 2 MPCDKCEAKFTKLVTPDV-----------KEGSKRIVGVNKLIEKATKKDKLVIVGSKCK 50 M C CE K TK+V D G K + N+LI + K IVG+KCK Sbjct 1 MVCGDCEKKLTKIVGVDPYRNKKVNRNADGSGPKTVTTKNRLIGV---QKKATIVGAKCK 57 Query 51 ICKTALHMKGK-YCAPCAHVNGRCWMCGKRIVDV 83 +CK +H G YC+ CA+ G C MCGK+I + Sbjct 58 LCKMLIHQPGSHYCSTCAYQKGICAMCGKKIQNT 91 > 7297565 Length=116 Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 7/96 (7%) Query 1 EMPCDKCEAKFTKLVTPDVKEGSKRIVGVNKLIEK---ATKKDKLVIVGS---KCKICKT 54 +M C+KCEAK +K+ P+ S G K+ E ++ +++ +G+ C+IC+ Sbjct 19 KMVCEKCEAKLSKVSAPNPWRTSTAPAGGRKINENKALSSARERYNPIGTALPPCRICRQ 78 Query 55 ALHMKGK-YCAPCAHVNGRCWMCGKRIVDVSKHNMS 89 +H G YC CA+ C MCGK+I++ + S Sbjct 79 KVHQMGSHYCQACAYKKAICAMCGKKIMNTKNYKQS 114 > YNL041c Length=839 Score = 28.5 bits (62), Expect = 3.2, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Query 6 KCEAKFTKLVTPDVKEGSKRIVGVNKLIEKATKK 39 K E+ F L P++ G+ I+GVN+++EK KK Sbjct 314 KDESSFL-LTLPNLNAGNALIMGVNEILEKTNKK 346 > Hs4503545 Length=154 Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query 36 ATKKDKLVIV-GSKCKICKTALHMKGKYCAPCAHVNGRCWMCGKRIVDV--SKHNMSL 90 A +K+ V++ G CKI + + GK+ H+ G GK+ D+ S HNM + Sbjct 24 ALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDV 81 > YDR265w Length=337 Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%) Query 48 KCKICKTALHMKGKYCAPCAHVNGRCWMC 76 KC +C ++M CAPC H+ CW C Sbjct 285 KCILC--LMNMSDPSCAPCGHL--FCWSC 309 > Hs9966867 Length=153 Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query 36 ATKKDKLVIV-GSKCKICKTALHMKGKYCAPCAHVNGRCWMCGKRIVDV--SKHNMSL 90 A +K+ V++ G CKI + + GK+ H+ G GK+ D+ S HNM + Sbjct 24 ALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDV 81 > 7293708_2 Length=332 Score = 27.3 bits (59), Expect = 7.2, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 3/40 (7%) Query 11 FTKLVTPDVKEGSKRIVGVN---KLIEKATKKDKLVIVGS 47 F K V P+ E + R++G + K+++ K DK+V+VG+ Sbjct 150 FWKKVPPEAVEINPRLLGTSLASKILKPLKKNDKIVLVGT 189 Lambda K H 0.322 0.135 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1174483934 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40