bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_1252_orf2
Length=205
Score E
Sequences producing significant alignments: (Bits) Value
7300580 53.5 3e-07
SPAPB2B4.01c 53.1 4e-07
CE19222 43.1 3e-04
Hs22056522 31.2 1.3
Hs20555610 31.2 1.4
Hs22056729 31.2 1.5
Hs9506773 31.2 1.5
> 7300580
Length=390
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query 2 ELAAAAAAFCVPKENFVCLDEKGMKDG-WTKWDSKAVCAAVKSFVEKRKQIQVIFSFDEL 60
EL + + +P+ N V ++ + D + W AV + + +E IQ IF+FD
Sbjct 212 ELWRSCSKLGIPESNIVLMNATNLPDDPYVDWRPDAVASLILHTIESL-DIQAIFTFDRD 270
Query 61 GVSRHPNHCSVY 72
GVS HPNHC+VY
Sbjct 271 GVSSHPNHCAVY 282
> SPAPB2B4.01c
Length=248
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query 2 ELAAAAAAFCVPKENFVCLDEKGMKDGW-TKWDSKAVCAAVKSFVEKRKQIQVIFSFDEL 60
EL AA+ + + K N + + ++DG KWD V + +E R I+ + +FD
Sbjct 83 ELVVAASKYQIDKTNVHVVSDPQLQDGMQAKWDPTDVAKHISQIIE-RYNIKTLITFDNK 141
Query 61 GVSRHPNHCSVYEG 74
G+S HPNH + YEG
Sbjct 142 GISGHPNHIACYEG 155
> CE19222
Length=151
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query 2 ELAAAAAAFCVPKENFVCLDEKGMKDGWTKWDSKAVCAAVKSFVEKRKQIQVIFSFDELG 61
EL+ AA+ + + +CLD DG T W+ A+C V VE VI SFD G
Sbjct 82 ELSRAASKLGISASDVICLDYDEFADGDT-WNRNALCQIVMRHVEVLAADTVI-SFDSHG 139
Query 62 VSRHPNH 68
VS H NH
Sbjct 140 VSGHHNH 146
> Hs22056522
Length=782
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query 130 QQEAEDEQQQREQQQMQDMQLLPSVFIFSLQSYGLLRKYS--GVLNLIPATIDANNKGVD 187
Q+EA E+ QR +++Q+++ ++ + +LQ GLL +Y +L ++P+ +D V
Sbjct 658 QEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVVS 717
> Hs20555610
Length=782
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query 130 QQEAEDEQQQREQQQMQDMQLLPSVFIFSLQSYGLLRKYS--GVLNLIPATIDANNKGV 186
Q+EA E+ QR +++Q+++ ++ + +LQ GLL +Y +L ++P+ +D V
Sbjct 658 QEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVV 716
> Hs22056729
Length=782
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query 130 QQEAEDEQQQREQQQMQDMQLLPSVFIFSLQSYGLLRKYS--GVLNLIPATIDANNKGV 186
Q+EA E+ QR +++Q+++ ++ + +LQ GLL +Y +L ++P+ +D V
Sbjct 658 QEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVV 716
> Hs9506773
Length=782
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query 130 QQEAEDEQQQREQQQMQDMQLLPSVFIFSLQSYGLLRKYS--GVLNLIPATIDANNKGV 186
Q+EA E+ QR +++Q+++ ++ + +LQ GLL +Y +L ++P+ +D V
Sbjct 658 QEEARKEEGQRLARRLQELERDKNLMLATLQQEGLLSRYKQQRLLTVLPSLLDKKKSVV 716
Lambda K H
0.317 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3658712052
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40