bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_1091_orf1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
At4g29410 54.3 1e-07
SPAC1687.06c 53.1 3e-07
At2g19730 53.1 3e-07
Hs13904866 44.7 1e-04
CE06313 38.9 0.005
7292335 37.7 0.011
7292336 36.2 0.036
YNL040w 28.9 5.9
> At4g29410
Length=143
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query 53 AELLWQCVRRTSCFLKKSHG-----IVLTREPLNLTQKNTLRHSGLCHPRPLGLQLVGNN 107
+L+W+ V+R +CFL K G + ++E NL N+ +HSGL + + + +Q G +
Sbjct 6 GQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQAAGKD 65
Query 108 AAVKL-SYRPKNPNKARFP-RRALCSKKFPKSHSKTKQLQQLVAQQRPDLVRLAKKRFHK 165
V L + + K NK + +++ K+F + SK Q + RPDL + A R
Sbjct 66 QGVVLGTTKTKRQNKPKLSVNKSILKKEFSR-MSKVVANQVVDNYYRPDLKKAALARLSA 124
Query 166 LCK 168
+ K
Sbjct 125 ISK 127
> SPAC1687.06c
Length=134
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query 51 ASAELLWQCVRRTSCFLKKS---HGIVLTREPLNLTQKNTLRHSGLCHPRPLGLQLVGNN 107
S +L+WQ +R + FL K GI REP+N++ KN R SGLC+ + +G+Q
Sbjct 3 VSNDLIWQVIRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANSPR 62
Query 108 AAVKLS-YRPKNPNK-ARFPRRALCSKKFPKSHSKTKQLQQLVAQQRPDLVRLAKKR 162
V ++ PKN K A+ R+ + + + K+ + R DLV+++ R
Sbjct 63 GVVLITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSVAR 119
> At2g19730
Length=143
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query 53 AELLWQCVRRTSCFLKKSHG-----IVLTREPLNLTQKNTLRHSGLCHPRPLGLQLVGNN 107
+L+W+ V+ +CFL K G + ++E NLT ++ +HSGL + + + +Q +
Sbjct 6 GQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKD 65
Query 108 AAVKL-SYRPKNPNKARFP-RRALCSKKFPKSHSKTKQLQQLVAQQRPDLVRLAKKRFHK 165
AV L + + K NK + +++ K+FP+ SK Q + RPDL + A R
Sbjct 66 QAVVLATTKTKKQNKPKLSVNKSILKKEFPR-MSKAVANQVVDNYYRPDLKKAALARLSA 124
Query 166 LCK 168
+ K
Sbjct 125 ISK 127
> Hs13904866
Length=137
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 0/59 (0%)
Query 52 SAELLWQCVRRTSCFLKKSHGIVLTREPLNLTQKNTLRHSGLCHPRPLGLQLVGNNAAV 110
SA L W VR S FL K + + EP NL +N+ R++GL H + +G++ + V
Sbjct 2 SAHLQWMVVRNCSSFLIKRNKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGV 60
> CE06313
Length=126
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query 52 SAELLWQCVRRTSCFLKKSHGIV--LTREPLNLTQKNTLRHSGLCHPRPLGLQLVGNNAA 109
S L+WQ +R S FL+ GI + E NL + N+ ++SGL + + +
Sbjct 2 SDALVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDVSAAAKGVV 61
Query 110 VKLSYRPKNPNKA 122
V P KA
Sbjct 62 VSTKNEKGRPAKA 74
> 7292335
Length=144
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query 52 SAELLWQCVRRTSCFLKKSHGIV--LTREPLNLTQKNTLRHSGLCHPRPLGL 101
S+ L W +R + FL K + + EP NL ++ R+SG+ H + LG+
Sbjct 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGV 55
> 7292336
Length=165
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query 52 SAELLWQCVRRTSCFLKKSHGIV--LTREPLNLTQKNTLRHSGLCHPRPLGL 101
S+ L W +R + FL K + + EP NL ++ R+SG+ H + LG+
Sbjct 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGV 55
> YNL040w
Length=456
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 0/66 (0%)
Query 5 KTKQLQQLVAQQRPDLVRLAKKRFHKLCKTSPKPAQAEQQQQQQKMASAELLWQCVRRTS 64
+TKQ+QQL +++ + RLA+ +L T + +++ + ELL Q + S
Sbjct 310 QTKQIQQLNKREQYWIKRLARTASEELMNTLKASGKKRAYFMEEEYGTLELLLQIHKEVS 369
Query 65 CFLKKS 70
FLK
Sbjct 370 NFLKDD 375
Lambda K H
0.318 0.128 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2815454148
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40