bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0376_orf2
Length=185
Score E
Sequences producing significant alignments: (Bits) Value
SPCC1739.01_1 52.4 5e-07
YPL054w 51.2 1e-06
Hs22050713 50.4 2e-06
Hs7305273 50.1 3e-06
CE25488 49.7 3e-06
CE16006 45.4 7e-05
Hs13540509 45.1 8e-05
CE15683 43.9 2e-04
At1g30460_1 42.0 8e-04
CE28097 41.6 9e-04
SPBC1718.07c 40.0 0.003
7292800 39.7 0.004
At3g06410 30.8 1.8
> SPCC1739.01_1
Length=319
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 8/57 (14%)
Query 94 VLCRYFQSGYCPAGESCTFIHSSEDSITPATQQ--CKNFLMGSCKNGINCPFAHSTP 148
V C++F++G C AGE+C F HS E T++ CK FL G+CK G C +H+ P
Sbjct 45 VPCKFFRNGTCTAGENCPFSHSLE------TERPICKYFLKGNCKFGPKCALSHALP 95
> YPL054w
Length=301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 0/60 (0%)
Query 90 DYRTVLCRYFQSGYCPAGESCTFIHSSEDSITPATQQCKNFLMGSCKNGINCPFAHSTPH 149
DY V C++F+ G C AG SC F HS + + CK F G+CK G C AH P+
Sbjct 87 DYSHVPCKFFKMGNCQAGSSCPFSHSPDIISSANNLPCKYFAKGNCKFGNKCVNAHVLPN 146
> Hs22050713
Length=1303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query 94 VLCRYFQSGYCPAGESCTFIHSSEDSITPATQQCKNFLMGSCKNGINCPFAH 145
V+C+YF G C G+ C F H E + + CK ++ G C NCP+ H
Sbjct 394 VICKYFVEGRCTWGDHCNFSHDIE--LPKKRELCKFYITGFCARAENCPYMH 443
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Query 95 LCRYFQSGYCPAGESCTFIHSSEDSITPATQQCKNF-LMGSCKNGINCPFAHS 146
LC+++ +G+C E+C ++H CK + G+C NG +C F+H
Sbjct 424 LCKFYITGFCARAENCPYMH--------GDFPCKLYHTTGNCINGDDCMFSHD 468
> Hs7305273
Length=482
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query 94 VLCRYFQSGYCPAGESCTFIHSSEDSITPATQQCKNFLMGSCKNGINCPFAHSTP 148
V CRYF G C G++C + H DS P + CK F G C G C + HS P
Sbjct 59 VTCRYFMHGVCKEGDNCRYSHDLSDS--PYSVVCKYFQRGYCIYGDRCRYEHSKP 111
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 0/27 (0%)
Query 127 CKNFLMGSCKNGINCPFAHSTPHSSSS 153
C+ F+ G CK G NC ++H S S
Sbjct 61 CRYFMHGVCKEGDNCRYSHDLSDSPYS 87
> CE25488
Length=413
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query 96 CRYFQSGYCPAGESCTFIHSSEDSITPATQQCKNFLMGSCKNGINCPFAHSTPHSS 151
CRYF +GYC G +CTF H D T C L+G C G C F H+ P +
Sbjct 8 CRYFANGYCSKGNTCTFTH---DVATRNENICHFNLVGKCSYGRACRFLHTRPRND 60
> CE16006
Length=203
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query 91 YRTVLCRYFQSG-YCPAGESCTFIHSSEDSITPATQQ---------CKNF-LMGSCKNGI 139
++T LC + + G C GE C F HS + P T++ C NF G CK GI
Sbjct 89 FKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRNHRNYKTVLCNNFSTTGHCKYGI 148
Query 140 NCPFAHSTPHSSSS 153
C F H + +S+SS
Sbjct 149 RCQFIHRSMNSTSS 162
> Hs13540509
Length=485
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query 94 VLCRYFQSGYCPAGESCTFIHSSEDSITPATQQCKNFLMGSCKNGINCPFAHSTP 148
V CRYF+ G C G++C + H D + CK F G C G C HS P
Sbjct 94 VTCRYFKYGICKEGDNCRYSHDLSDRLCGVV--CKYFQRGCCVYGDRCRCEHSKP 146
> CE15683
Length=203
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query 91 YRTVLCRYFQSG-YCPAGESCTFIHSSEDSITPATQQ---------CKNF-LMGSCKNGI 139
++T LC + + G C GE C F HS + P T++ C NF G CK GI
Sbjct 89 FKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRNHRNYKTVLCNNFSTTGHCKYGI 148
Query 140 NCPFAHSTPHSSSS 153
C F H + S+SS
Sbjct 149 RCQFIHRSMDSTSS 162
> At1g30460_1
Length=281
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query 59 SNSSSSNSSSSSSSNSKMAALGAGREVQPSLDYRTVLCRYFQSGYCPAGESCTFIHSSED 118
++SS++ + + + +S GAGR +R +CR++ G C G++C F+H +
Sbjct 33 NSSSAAVNVAPTYDHSSATVAGAGR----GRSFRQTVCRHWLRGLCMKGDACGFLHQFDK 88
Query 119 SITPA-----------------------TQQCKNFLMGSCKNGINCPFAHS 146
+ P ++C + +G C NG +C + H+
Sbjct 89 ARMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHA 139
> CE28097
Length=494
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query 91 YRTVLCRYFQ-SGYCPAGESCTFIHSSEDSITPA-----------TQQCKNFL-MGSCKN 137
++T LC F+ SG CP GE+C F H + P+ TQ C F G C
Sbjct 139 FKTALCDAFKRSGSCPYGEACRFAHGENELRMPSQPRGKAHPKYKTQLCDKFSNFGQCPY 198
Query 138 GINCPFAH 145
G C F H
Sbjct 199 GPRCQFIH 206
> SPBC1718.07c
Length=404
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query 91 YRTVLCRYFQ-SGYCPAGESCTFIHSSEDSITPA------TQQCKNFLM-GSCKNGINCP 142
Y+T C+ +Q SG C G C F H +++ P +++C++F+M G C G+ C
Sbjct 327 YKTEPCKNWQISGTCRYGSKCQFAHGNQELKEPPRHPKYKSERCRSFMMYGYCPYGLRCC 386
Query 143 FAH 145
F H
Sbjct 387 FLH 389
> 7292800
Length=448
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query 91 YRTVLCRYFQ-SGYCPAGESCTFIHSSED------SITPATQQCKNFL-MGSCKNGINCP 142
Y+T LCR F+ +G C GE C F H S + T+ C+ F +G C G C
Sbjct 138 YKTELCRPFEEAGECKYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCH 197
Query 143 FAHS 146
F H+
Sbjct 198 FVHN 201
> At3g06410
Length=437
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 18/72 (25%)
Query 95 LCRYF-QSGYCPAGESCTFIHSSEDS----------------ITPATQQCKNFL-MGSCK 136
+C++F ++G C G SC + H + + P ++C +L G CK
Sbjct 80 VCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCK 139
Query 137 NGINCPFAHSTP 148
G+ C F H P
Sbjct 140 FGLTCRFNHPVP 151
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 18/67 (26%)
Query 96 CRYF-QSGYCPAGESCTFIHSSEDSITPATQ---------------QCKNFL-MGSCKNG 138
C+YF ++G C G SC + H D++ P T QC +F G CK G
Sbjct 288 CQYFMRTGDCKFGSSCRY-HHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFG 346
Query 139 INCPFAH 145
C F H
Sbjct 347 PACKFDH 353
Lambda K H
0.310 0.118 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2986559618
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40