bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0261_orf3
Length=58
Score E
Sequences producing significant alignments: (Bits) Value
At3g13640 85.9 2e-17
Hs20532766 84.0 7e-17
At4g19210 81.3 4e-16
Hs4506559 80.9 5e-16
7295014 79.3 1e-15
YDR091c 78.6 3e-15
CE21713 75.5 2e-14
SPBC14F5.06 69.3 2e-12
ECU11g1580 56.6 1e-08
CE27445 28.9 2.2
CE01108 27.3 6.7
> At3g13640
Length=603
Score = 85.9 bits (211), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/53 (73%), Positives = 44/53 (83%), Gaps = 0/53 (0%)
Query 5 SPDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVLDD 57
SP SL++GMN FL L ITFRRDPTNFRPRINKL+S KDKEQK G+Y+ LDD
Sbjct 551 SPQSLLSGMNHFLSHLNITFRRDPTNFRPRINKLESIKDKEQKTAGSYYYLDD 603
> Hs20532766
Length=599
Score = 84.0 bits (206), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 45/54 (83%), Gaps = 0/54 (0%)
Query 4 SSPDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVLDD 57
+SP +L+ GMN+FL L+ITFRRDP N+RPRINKL+S KD EQK +GNYF LDD
Sbjct 546 NSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD 599
> At4g19210
Length=600
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 45/56 (80%), Gaps = 0/56 (0%)
Query 2 TRSSPDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVLDD 57
T + P SL++GMN FL L ITFRRDPTNFRPRINKL+S KD+EQK G+Y+ LDD
Sbjct 545 TANCPQSLLSGMNLFLSHLNITFRRDPTNFRPRINKLESTKDREQKSAGSYYYLDD 600
> Hs4506559
Length=599
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 0/53 (0%)
Query 5 SPDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVLDD 57
SP +L+ GMN+FL L+ITFRRDP N+RPRINKL+S KD EQK +GNYF LDD
Sbjct 547 SPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD 599
> 7295014
Length=611
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 0/57 (0%)
Query 2 TRSSPDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVLDDS 58
T SP SL+NGMNRFL +L ITFRRDP NFRPRINK +S KD EQK +G +F L+D
Sbjct 552 TAFSPQSLLNGMNRFLELLGITFRRDPNNFRPRINKNNSVKDTEQKRSGQFFFLEDE 608
> YDR091c
Length=608
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%), Gaps = 0/54 (0%)
Query 5 SPDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVLDDS 58
+P+SL+ G NRFL+ L +TFRRDP +FRPRINKLDS DKEQK +GNYF LD++
Sbjct 553 APESLLTGCNRFLKNLNVTFRRDPNSFRPRINKLDSQMDKEQKSSGNYFFLDNT 606
> CE21713
Length=610
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
Query 2 TRSSPDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVLDD 57
T P SL+ GMNRFL++L ITFRRD +RPRINKLDS KD +QK +G +F LDD
Sbjct 554 TACKPQSLLEGMNRFLKMLDITFRRDQETYRPRINKLDSVKDVDQKKSGQFFFLDD 609
> SPBC14F5.06
Length=593
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 0/52 (0%)
Query 6 PDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVLDD 57
P SL+ GMN FL+ L +TFRRDP RPRINK DS D+EQK GNYF L++
Sbjct 542 PQSLLTGMNTFLKNLDVTFRRDPNTLRPRINKFDSQMDQEQKNAGNYFFLEN 593
> ECU11g1580
Length=624
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 0/50 (0%)
Query 4 SSPDSLVNGMNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYF 53
S P L++GMN FL+ L +TFRRD +N RPR+NK S KD+ QK YF
Sbjct 573 SPPMGLLDGMNIFLKSLDVTFRRDSSNLRPRVNKPGSAKDRIQKENNQYF 622
> CE27445
Length=625
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query 10 VNG-MNRFLRVLQITFRRDPTNFRPRINKLDSCKDKEQKLTGNYFVL 55
+NG MN + LQ PTNF P I ++ + K K T Y +L
Sbjct 414 INGVMNAYRHALQNVTLYGPTNFSPIIVEVANKAQKMMKTTARYQIL 460
> CE01108
Length=784
Score = 27.3 bits (59), Expect = 6.7, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query 7 DSLVNGMNRFLRVL--QITFRRDPTNFRPRINKLDSCKDKEQKL 48
D++V G+ + LR+L + RD T + + K+D ++ EQ+L
Sbjct 683 DTMVLGLGKNLRLLGFDVYIPRDVTELKEFLRKMDKMEESEQRL 726
Lambda K H
0.321 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1187999082
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40