bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0208_orf4
Length=253
Score E
Sequences producing significant alignments: (Bits) Value
Hs8923139 45.8 8e-05
At1g48090 43.5 4e-04
Hs15619008 42.4 0.001
Hs15619010 42.0 0.001
At4g17120 41.6 0.002
SPBC31F10.18c 36.6 0.056
CE16315 33.1 0.62
YLL040c 32.7 0.74
ECU04g0690 32.7 0.81
CE26945 32.0 1.2
Hs22041525 31.2 2.0
7304192 31.2 2.4
7300458 30.8 3.0
At5g17440 30.8 3.0
Hs18571717 30.8 3.1
At4g32620 29.3 8.7
> Hs8923139
Length=442
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Query 1 KGIGKGLVGSLVKPLDRVGQAVSDVTRGIH--AEVSKPMGALKLINKRLRNPRMIGEQGQ 58
KGIGKGLVG++ +P + S +GI AE ++ + +L R PR+I E G
Sbjct 242 KGIGKGLVGAVARPTGGIVDMASSTFQGIQRAAESTEEVSSL-------RPPRLIHEDGI 294
Query 59 VRPYDETEAQ 68
+RPYD E++
Sbjct 295 IRPYDRQESE 304
> At1g48090
Length=4099
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query 2 GIGKGLVGSLVKPLDRVGQAVSDVTRGIHAEVSKPMGAL----KLINKRLRNPRMIGEQG 57
G GKG++G+ +P+ V +S T G +A K A+ +L+ +RL PR +G
Sbjct 3853 GFGKGIIGAAAQPVSGVLDLLSKTTEGANAMRMKIAAAITSDEQLLRRRL--PRAVGADS 3910
Query 58 QVRPYDETEAQLRQSLGLA 76
+RPY++ AQ + L LA
Sbjct 3911 LLRPYNDYRAQGQVILQLA 3929
> Hs15619008
Length=3095
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query 1 KGIGKGLVGSLVKPLDRVGQAVSDVTRGIH--AEVSKPMGALKLINKRLRNPRMIGEQGQ 58
KG+GKGLVG++ +P + S +GI E S+ + LR PR E G
Sbjct 2996 KGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEV--------ESLRPPRFFNEDGV 3047
Query 59 VRPYDETEAQLRQSLGLAVLRPMQ 82
+RPY +LR G +L+ +Q
Sbjct 3048 IRPY-----RLRDGTGNQMLQKIQ 3066
> Hs15619010
Length=3174
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query 1 KGIGKGLVGSLVKPLDRVGQAVSDVTRGIH--AEVSKPMGALKLINKRLRNPRMIGEQGQ 58
KG+GKGLVG++ +P + S +GI E S+ + LR PR E G
Sbjct 2996 KGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEV--------ESLRPPRFFNEDGV 3047
Query 59 VRPYDETEAQLRQSLGLAVLRPMQ 82
+RPY +LR G +L+ M+
Sbjct 3048 IRPY-----RLRDGTGNQMLQVME 3066
> At4g17120
Length=1661
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query 2 GIGKGLVGSLVKPLDRVGQAVSDVTRGIHAEVSKPMGAL--KLINKRLRNPRMIGEQGQV 59
G+G+ +G +V+P+ S GI A S+ + L + +R+RNPR + G +
Sbjct 1582 GVGRAFLGFIVQPVSGALDFFSLTVDGIGASCSRCLEVLSNRTALERIRNPRAVHADGIL 1641
Query 60 RPYDETEA 67
R YDE EA
Sbjct 1642 REYDEKEA 1649
> SPBC31F10.18c
Length=600
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query 1 KGIGKGLVGSLVKPLDRVGQAVSDVTRGIHAEVSKPMGALKLINKRLRNPRMIGEQGQVR 60
KG+GKGLVG KPL + S ++ G A + + + I K LR R++ + G V
Sbjct 423 KGLGKGLVGFTTKPLVGLFDFASSISEG--ARNTTTVFDERHIEK-LRLSRLMSDDGVVY 479
Query 61 PYDETEAQLRQSLGLAVLRPMQK 83
P+ QLR++LG L+ +
Sbjct 480 PF-----QLREALGQYWLKHLDN 497
> CE16315
Length=628
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 0/69 (0%)
Query 104 PQDIFLVDLKGGLQGTQQGTSRRGSSAGDEAGGQVHVLWHVSVADIREVKAGSHGVIVRT 163
PQDI + L GT + T+ SS D G + +W V IR SH +++
Sbjct 548 PQDIKIDKKMDCLTGTPEYTNYTASSQKDGFVGCLDYIWGVGATSIRHCPLPSHEKVIKY 607
Query 164 SQSSSGAQP 172
+ S P
Sbjct 608 TALPSPISP 616
> YLL040c
Length=3144
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query 1 KGIGKGLVGSLVKPLDRVGQAVSDVTRGIHAEVSKPMGALKLINK-RLRNPRMIGEQGQV 59
KG+GKG+VG K S++++G+ + + L + R+R PR + +
Sbjct 2971 KGLGKGIVGLPTKTAIGFLDLTSNLSQGVKSTTT----VLDMQKGCRVRLPRYVDHDQII 3026
Query 60 RPYDETEAQ 68
+PYD EAQ
Sbjct 3027 KPYDLREAQ 3035
> ECU04g0690
Length=2371
Score = 32.7 bits (73), Expect = 0.81, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query 1 KGIGKGLVGSLVKPLDRVGQAVSDVTRGIHAEVSKPMGALKLINKRLRNPRMIGEQGQVR 60
KG+GKG++G+ +P+ V V+ ++ I + + KRL+ PR +G V
Sbjct 2220 KGLGKGILGAFTRPIVEVADLVTGISDTIKVSMDGRI-------KRLQYPR---PRGFVG 2269
Query 61 PYDETEAQ 68
YDE +Q
Sbjct 2270 WYDEGMSQ 2277
> CE26945
Length=815
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query 142 WHVSVADIREVKAGSHGVIVRTSQSSSGAQPQTEAGLGRASTLGIMAKTQAGRRSTQPSV 201
+H+ +++V +G +G + Q+SSG E +G GI+ + A + S+
Sbjct 70 YHI----VQDVLSGYNGTVFAYGQTSSGKTHTMEGVIGDNGLSGIIPRIVADIFNHIYSM 125
Query 202 TTGAQRDIMQTFHIPCANAALANEVYRELLETQRGSATIVE 242
Q FHI + + NE R+LL+ ++ + +I E
Sbjct 126 DENLQ------FHIKVSYYEIYNEKIRDLLDPEKVNLSIHE 160
> Hs22041525
Length=1231
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 17/80 (21%)
Query 2 GIGKGLVGSLVKPL-------DRVGQAVSDVTRGIHAEVSKPMGALKLINKRLRNPRMI- 53
G+GKGLVG++ KP+ QAV D A +S P + +R+R PR
Sbjct 1027 GLGKGLVGTVTKPVAGALDFASETAQAVRDT-----ATLSGP----RTQAQRVRKPRCCT 1077
Query 54 GEQGQVRPYDETEAQLRQSL 73
G QG + Y E++A+ ++ L
Sbjct 1078 GPQGLLPRYSESQAEGQEQL 1097
> 7304192
Length=3242
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query 1 KGIGKGLVGSLVKPLDRVGQAVSDVTRGIHAEVSKPMGALKLINKRLRNPRMIGEQGQVR 60
KG+GKG +G + +P V D G V + A + + KR+R PR +R
Sbjct 3048 KGLGKGAIGLVARPT----AGVVDFASGSFEAVKRAADASEDV-KRMRPPRFQHYDFVLR 3102
Query 61 PYDETEA 67
PY EA
Sbjct 3103 PYCLMEA 3109
> 7300458
Length=486
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query 9 GSLVKPLDRVGQAVSDVTRGIHAEVSKPMGALKLINKRLRN--PRMIGEQGQVRPYDETE 66
G + +D V V D++ G V K +LKL +K+L N +++ E ++R
Sbjct 12 GVSLNTVDSVDGFVQDISNGHWDTVLKVTQSLKLPDKKLLNLYEQIVLELIELRELGAAR 71
Query 67 AQLRQSLGLAVLRPMQKCMTVLEQDTPQR-CHLAVLFYPQDIFLVDLKGGLQGTQQGTSR 125
+ LRQ+ MT+L+Q P+R HL + Q + + +G+ + +
Sbjct 72 SLLRQT----------DPMTMLKQQEPERYIHLENML--QRAYFDPREAYAEGSSK--EK 117
Query 126 RGSSAGDEAGGQVHVL 141
R + E G+VHV+
Sbjct 118 RRTVIAQELSGEVHVV 133
> At5g17440
Length=381
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query 41 KLINKRLRNPRMIGEQGQVRPYDETEAQLRQSLGLAVLRPMQKCMTVLEQDTPQRCHLAV 100
++IN++L+ +GEQG V DE + L ++ L L Q+ + D+ + V
Sbjct 185 EMINEKLKKAEELGEQGMV---DEAQKALEEAEALKKLTARQEPVV----DSTKYTAADV 237
Query 101 LFYPQDIFLVDLKGGLQGTQQGTSRRGSSAGDEAGGQVHV---LWHVSVADIREVKAGSH 157
Q + L D+ G R D GG++H+ L +A+++E K H
Sbjct 238 RITDQKLRLCDICGAFLSVYDSDRR----LADHFGGKLHLGYMLIRDKLAELQEEKNKVH 293
> Hs18571717
Length=433
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query 96 CHLAVLFYPQDIFLVDLKGGLQGTQQGTSRRGSSAGDEAGGQVHVLWHVSVADIREVKAG 155
CHL V P + D GL+GT G++ G AG GG+ + + D+ V+AG
Sbjct 202 CHLGVTLKPSSL---DTHPGLRGTFYGSA--GHEAGRSDGGRGRLGAGTHLPDVMTVQAG 256
Query 156 SHGVIVRTSQ 165
+ G R Q
Sbjct 257 AVGEWARDKQ 266
> At4g32620
Length=1544
Score = 29.3 bits (64), Expect = 8.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query 9 GSLVK--PLDRVGQAVSDVTRGIHAEVSKPM-GALKLINKRLRNPRMIGEQGQVRPYDET 65
GSL+K P R+ ++ +DVT+GI ++ + A L+ R R G Q + P+D
Sbjct 1013 GSLLKGMPNKRIRRSTADVTKGIQKDLESSLCDANVLVTLGDRGWREYGAQIFLEPFDNN 1072
Query 66 EAQL 69
E +L
Sbjct 1073 EWRL 1076
Lambda K H
0.316 0.131 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 5223052002
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40