bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0043_orf1
Length=376
Score E
Sequences producing significant alignments: (Bits) Value
At1g24340 60.8 4e-09
YGR255c 40.4 0.006
At3g24200 36.2 0.11
SPBC146.12 34.7 0.37
At5g05600 33.1 1.00
CE11878 32.7 1.4
CE02791 32.3 1.6
7304159 31.6 3.0
Hs4505377 31.2 3.5
Hs7705594 31.2 3.8
CE06267 31.2 4.0
Hs11434986 31.2 4.1
SPBC713.12 31.2 4.3
Hs4504891 30.8 5.1
YBL098w 30.4 5.9
> At1g24340
Length=707
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 0/81 (0%)
Query 54 RLLLAGDAAHVHPSILGQGMNLGMQNAYNLGWKLARVLRHGASPQLLDSYSEEAKQAAEQ 113
R++LAGDAAH P G GMN G+Q+A+NL WK+A +++ A+ +L +Y E + A
Sbjct 389 RVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIAALVQGSANSSILKTYETERRPIALS 448
Query 114 VVGLSDRFFQSVLSANGSGGL 134
LS + F++ +S + GL
Sbjct 449 NTSLSVQNFRAAMSVPSALGL 469
> YGR255c
Length=479
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query 54 RLLLAGDAAHVHPSILGQGMNLGMQNAYNLGWKLARVLRHG---ASPQLLDSYSEEAKQA 110
R+ L GDAAH + GQG+N+G + + L + L + + G S L+ + E +
Sbjct 368 RVALVGDAAHTTHPLAGQGLNMGQTDVHGLVYALEKAMERGLDIGSSLSLEPFWAERYPS 427
Query 111 AEQVVGLSDRFFQ 123
++G++D+ F+
Sbjct 428 NNVLLGMADKLFK 440
> At3g24200
Length=509
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query 39 VYKSAVRMASVLRRKRLLLAGDAAH-VHPSILGQGMNLGMQNAYNLGWKLARVLRHGA-- 95
++ ++R A KR+ L GD+AH VHP + GQG+NLG +A L +A + G
Sbjct 378 MFPLSLRHAKDYVSKRVALVGDSAHTVHP-LAGQGVNLGFADACALSKAIAEGIALGTDI 436
Query 96 -SPQLLDSYSEEAKQAAEQVVGLSD 119
LL Y E K A ++ + D
Sbjct 437 GEANLLKRYEAERKPANIAMMAVLD 461
> SPBC146.12
Length=466
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query 31 VTEVYWSAVYKSAVRMASV--LRRKRLLLAGDAAH-VHPSILGQGMNLGMQNAYNLGWKL 87
+TE+ + +R+A V ++ + L GDAAH HP + GQG+N G+Q+ +L L
Sbjct 331 ITEIVSGSRAAFPLRLAHVDEYVKEGIALCGDAAHNTHP-LAGQGLNTGIQDVESLISAL 389
Query 88 ARVLRHG---ASPQLLDSYSEEAKQAAEQVVGLSDRF 121
+ ++HG S L Y + +G+ D+F
Sbjct 390 SFAIKHGQDIGSVFSLQPYFRDRYFKNHVYLGVVDKF 426
> At5g05600
Length=371
Score = 33.1 bits (74), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query 84 GWKLARVLRHGASPQLLDSYSEEAKQAAEQVVGLSDRFFQSVLSANGSGGLLSRLLLRMG 143
GW +V+ HG P+L+D+ E ++ V + + S + G G SRL + G
Sbjct 91 GWGFFQVVNHGVKPELMDAARENWREFFHMPVNAKETYSNSPRTYEGYG---SRLGVEKG 147
Query 144 AAV 146
A++
Sbjct 148 ASL 150
> CE11878
Length=466
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query 54 RLLLAGDAAH-VHPSILGQGMNLGMQNAYNLGWKLARVLRHGASPQLLDSYSEEAKQAAE 112
R L GDAAH +HP + GQG+NLG + L L +R GA + +Y E AA+
Sbjct 356 RCALIGDAAHRMHP-LAGQGVNLGWSDVQILDKVLGDAVREGADIGSI-TYLREYDSAAQ 413
Query 113 Q 113
+
Sbjct 414 K 414
> CE02791
Length=1020
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query 132 GGLLSRLLLRMGAAVASHLPSAARSFGQTLLMTRISYPQPSIA-LGNGDSSFISGLKPGC 190
GG ++R +LR RS G T+++ +S+P P++ +G S+F + L+ C
Sbjct 433 GGSITRSVLR---------DKFGRSIGNTMVVAALSWPHPAVVTVGAFLSTFGAALQCLC 483
Query 191 RAPDCLVKVAR 201
AP L +A+
Sbjct 484 SAPRLLQSIAK 494
> 7304159
Length=506
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
Query 56 LLAGDAAHVHPSILGQGMNLGMQNAYNLGWKLARVL 91
L+ GDAAH GQGMN GM++ L LA+ L
Sbjct 380 LILGDAAHAMVPYYGQGMNAGMEDVTLLTDILAKQL 415
> Hs4505377
Length=356
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 46/120 (38%), Gaps = 24/120 (20%)
Query 80 AYNLGWKLARVLRHGASPQLLDSYSEEAKQAAEQVVGLSDRFFQSVLSANGSGGLLS--- 136
A N W L+ +LR G SP L+ K GLS + N GG L
Sbjct 146 AKNYIWALSEILRSGKSPDLVSFVQTLCK-------GLSQP------TTNLVGGCLQLNP 192
Query 137 -RLLLRMGAAVASHLPSAARSFGQTLLMTRISYPQ---PSIALGNGDSSFISGLKPGCRA 192
L + HLP+A+ SF + SY PS G DSS + +KP A
Sbjct 193 RTFLPEQNQDMPPHLPTASASFP----VHPYSYQSPGLPSPPYGTMDSSHVFHVKPPPHA 248
> Hs7705594
Length=468
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query 52 RKRLLLAGDAAH-VHPSILGQGMNLGMQNAYNLGWKLA 88
R R+ L GDAAH VHP + GQG+N+G + +L L+
Sbjct 358 RPRVALIGDAAHRVHP-LAGQGVNMGFGDISSLAHHLS 394
> CE06267
Length=461
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 0/26 (0%)
Query 55 LLLAGDAAHVHPSILGQGMNLGMQNA 80
L+L GDAAH GQGMN G ++
Sbjct 310 LVLMGDAAHAMVPFYGQGMNCGFEDC 335
> Hs11434986
Length=468
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query 52 RKRLLLAGDAAH-VHPSILGQGMNLGMQNAYNLGWKLA 88
R R+ L GDAAH VHP + GQG+N+G + +L L+
Sbjct 358 RPRVALIGDAAHRVHP-LAGQGVNMGFGDISSLAHHLS 394
> SPBC713.12
Length=457
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query 48 SVLRRKRLLLAGDAAHVHPSILGQGMNLGMQNAYNLGWKLARVLRHGASPQLLD 101
+V R K ++L GD+ ++ + G GM + +AY L+R + A P LLD
Sbjct 281 TVNRTKGMILVGDSNNMRHPLTGGGMTVCFHDAY----LLSRFISPSAVPDLLD 330
> Hs4504891
Length=486
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
Query 43 AVRMASVLRRKRLLLAGDAAHVHPSILGQGMNLGMQNA 80
+V+ +S + +L GDAAH GQGMN G ++
Sbjct 287 SVKCSSFHFKSHCVLLGDAAHAIVPFFGQGMNAGFEDC 324
> YBL098w
Length=460
Score = 30.4 bits (67), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query 56 LLAGDAAHVHPSILGQGMNLGMQNAYNLGWKLARVLRH-GASPQLLDSYSEEAKQAAEQV 114
+L GDAAH GQGMN G ++ L +A + +H G + Y++ + +
Sbjct 310 ILLGDAAHAMVPFYGQGMNCGFEDVRIL---MALLKKHSGDRSRAFTEYTQTRHKDLVSI 366
Query 115 VGLSDRFFQSV 125
L+ R ++ +
Sbjct 367 TELAKRNYKEM 377
Lambda K H
0.317 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 9331090076
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40