bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_8074_orf1 Length=79 Score E Sequences producing significant alignments: (Bits) Value 42254.ENSSARP00000008522 77.8 8e-14 > 42254.ENSSARP00000008522 Length=260 Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 39/71 (54%), Positives = 56/71 (78%), Gaps = 0/71 (0%) Query 8 MPQNEYIEQHKKRFGERFDAAERRRKKEAREPHERARRAKLLRGIKAKVENKKRFLEKQK 67 MPQNEYIE H+KR+G R D E++RKKE RE HER+R+AK + G+KAK+ +K+R EK + Sbjct 1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSRKAKKMIGLKAKLYHKQRHAEKIQ 60 Query 68 MKKRIQLEDRK 78 MKK I++ +++ Sbjct 61 MKKTIKMHEKR 71 Lambda K H 0.323 0.138 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22947404809 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40