bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_7578_orf1 Length=73 Score E Sequences producing significant alignments: (Bits) Value 195103.CPF_0080 96.3 2e-19 > 195103.CPF_0080 Length=384 Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 44/73 (60%), Positives = 59/73 (80%), Gaps = 1/73 (1%) Query 1 VAKVTNALDACNIEYVVYDGISGEPTDKMVAEGVKLYQENECDFLIGLGGGSPMDSAKAI 60 V +T LD+ NIE+V+Y+ I+ EPTD M+ +G+KLY+EN+CDFLIGLGGGSP+DS KAI Sbjct 46 VKVLTEVLDSENIEHVLYNEINSEPTDTMIEKGIKLYKENQCDFLIGLGGGSPIDSTKAI 105 Query 61 GVMVASDAKKISD 73 G M+ ++ KISD Sbjct 106 GAMITNEG-KISD 117 Lambda K H 0.313 0.133 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22503773628 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40