bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_7183_orf1 Length=91 Score E Sequences producing significant alignments: (Bits) Value 190304.FN1642 170 9e-42 > 190304.FN1642 Length=276 Score = 170 bits (431), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 79/91 (86%), Positives = 88/91 (96%), Gaps = 0/91 (0%) Query 1 GECMATIGEVGNSEHSLVQIGKAGRNRHMGRRPHVRGSVMNPVDHPHGGGEGKNPVGRKA 60 GECMAT+GEVGNSEH+LV IGKAGR RHMG+RPHVRG+VMNPVDHPHGGGEGKN VGRK+ Sbjct 186 GECMATVGEVGNSEHNLVNIGKAGRARHMGKRPHVRGAVMNPVDHPHGGGEGKNSVGRKS 245 Query 61 PLTPWGKPALGVKTRGKKTTDKFIVRRRNDK 91 PLTPWGKPALG+KTRG+KT+DKFIVRRRN+K Sbjct 246 PLTPWGKPALGIKTRGRKTSDKFIVRRRNEK 276 Lambda K H 0.315 0.137 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22919213550 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40