bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_6704_orf2
Length=127
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFF1315w                                                       73.9    1e-12


> 5833.PFF1315w
Length=1712

 Score = 73.9 bits (180),  Expect = 1e-12, Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 70/123 (56%), Gaps = 4/123 (3%)

Query  7    NDRWRLYLPHVEKLLDAEGILLLRQTCRLLCKHKYRPADGVLSFGMFRGVDARVLMEQVV  66
            N+RW+ Y+ ++E  LD   I+ L QTC+   K K++ A   L F  + G + ++L E V 
Sbjct  259  NERWKRYIKNIEPFLDVHTIINLSQTCKFFYKRKFKVAYNRLIFKSYLGYNPKILYEYVF  318

Query  67   PLACKAVHPEVRAAGLSLDFSGCSLLKDASVARLMDVLHGRKEDN---IIGGVLKSLCLD  123
            P+  + +H  VR   L LDF+ C+L+KD +VA +++ ++  +  N   +    L+ +  D
Sbjct  319  PVIYRHLHRSVRRR-LCLDFTLCTLIKDITVANILNEIYNFETLNTKHLFIYNLQEIYFD  377

Query  124  FCY  126
            +C+
Sbjct  378  YCH  380



Lambda     K      H
   0.328    0.144    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22506847341


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40