bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6693_orf1 Length=187 Score E Sequences producing significant alignments: (Bits) Value 375451.RD1_2602 77.0 2e-13 > 375451.RD1_2602 Length=705 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 6/125 (4%) Query 32 CPGGWACASQRLLRXRRFFSREGVAVAGLGPRALEALMSRGYLEAPSDAFHLPQVDRQRT 91 C GG C +Q + R + F SR + GLG + +E G++ P+D F L R R Sbjct 446 CTGGLICPAQAVERLKHFVSRAAFDIDGLGAKQIEQFYKDGWISEPADIFTL----RDRF 501 Query 92 AAGESGIAGWPGWGPQARDALFKEIEQVQGRGVPLQQLLFALGIPGMGRRAAAAVSHHVR 151 +G + GWG ++ + LF I+ R +PL +L+FALGI +G A+ ++ H Sbjct 502 GSGIQQLKNRDGWGEKSANNLFDAID--DKRQIPLARLIFALGIRHVGEAASNLIAQHYS 559 Query 152 TIGGF 156 T F Sbjct 560 TFDAF 564 Lambda K H 0.321 0.138 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 40588496850 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40