bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6464_orf1 Length=112 Score E Sequences producing significant alignments: (Bits) Value 6239.C10C6.5.1 121 8e-27 > 6239.C10C6.5.1 Length=610 Score = 121 bits (303), Expect = 8e-27, Method: Composition-based stats. Identities = 57/112 (50%), Positives = 81/112 (72%), Gaps = 2/112 (1%) Query 1 GFLTVEEHLDCVARLRTGWKKEERSKLVDRLVELYGLTKVRNSRIGNIQMAAKRGISGGE 60 G LTV+E+LD A+LR E+R + V ++ GL K +N+RIG I ++GISGGE Sbjct 121 GTLTVKEYLDIQAKLRVNGDSEKRRRRVGNVMSQLGLYKCQNTRIGTI--GGQKGISGGE 178 Query 61 KKRLNIATEMMTNPSVIFADEPTTGLDSFIAENVMRIFRHLADRGRTIICTI 112 +RL A E+++NPS++F DEPTTGLDSF+AE+V+++ +LA GRT+ICTI Sbjct 179 MRRLTFACELLSNPSILFCDEPTTGLDSFMAESVVQVLSNLAKSGRTVICTI 230 Lambda K H 0.322 0.137 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22937329312 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40