bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6302_orf1 Length=58 Score E Sequences producing significant alignments: (Bits) Value 30611.ENSOGAP00000008000 60.5 1e-08 > 30611.ENSOGAP00000008000 Length=1216 Score = 60.5 bits (145), Expect = 1e-08, Method: Composition-based stats. Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 8/58 (13%) Query 1 VIDGMAREALRTICIAYRDFSADDVPDWEEKQHAPNQQFLVAEQDLVCLGIFGIMDPV 58 +I+ MA + LRTICIAYRDFSAD PDW+ N+ +V DL C+ + GI DPV Sbjct 634 IIEPMACDGLRTICIAYRDFSADQEPDWD------NENEVVG--DLTCIAVVGIEDPV 683 Lambda K H 0.325 0.142 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22638745755 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40