bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6195_orf1 Length=130 Score E Sequences producing significant alignments: (Bits) Value 3702.AT4G29040.1 108 6e-23 > 3702.AT4G29040.1 Length=443 Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 99/203 (48%), Gaps = 84/203 (41%) Query 7 PGGNDDKKDKKKEKKPLEAAPPSHVGRR-KKPKGAMGASKLPNVTPVTKCRMRLLKLERV 65 P G D KKEKK AAPP+ VGR+ +K KG A++LP VTP TKC++RLLKLER+ Sbjct 17 PDGGD-----KKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERI 71 Query 66 KDYVLLHNK----------------------------------------------TSSI- 78 KDY+L+ + +SS+ Sbjct 72 KDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVG 131 Query 79 ----VGILS----DEVDPLISVM-----------------------KVEKAPLETYGDIG 107 VGILS D+++P S++ KVEKAPLE+Y DIG Sbjct 132 PEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIG 191 Query 108 GLEKQIQEVKEAVEFPLTHPEFF 130 GLE QIQE+KEAVE PLTHPE + Sbjct 192 GLEAQIQEIKEAVELPLTHPELY 214 Lambda K H 0.313 0.136 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23020010250 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40