bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6162_orf1 Length=152 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.310 120 2e-26 > 5833.MAL13P1.310 Length=2030 Score = 120 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 49/82 (59%), Positives = 66/82 (80%), Gaps = 0/82 (0%) Query 66 NLLRALDYVLVVSQYSQKDEFNFTMKVFAHIPAALKPLPPLFGPEWSSVYLKGEWTRENA 125 ++LR +DYVL+VSQYSQK+EFNFT+KVF+H +L +PPL +SS+Y KG WT ++A Sbjct 1682 DVLRNIDYVLIVSQYSQKEEFNFTIKVFSHTHLSLYEIPPLLPDNYSSLYFKGMWTNKSA 1741 Query 126 GGCSNDLWNFFRNPQFRITVPE 147 GGCSN+LW++FRNP R+ VPE Sbjct 1742 GGCSNNLWSYFRNPHIRLYVPE 1763 Lambda K H 0.315 0.130 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22586169780 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40