bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6112_orf2 Length=131 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0649 147 8e-35 > 5833.PF14_0649 Length=2558 Score = 147 bits (371), Expect = 8e-35, Method: Composition-based stats. Identities = 66/130 (50%), Positives = 95/130 (73%), Gaps = 5/130 (3%) Query 4 VVGEWQQEVYEGKIGPRSHYAAIFITQRYQEPR-AEPRTIERLMLITSGVTTVMEGGRAR 62 +VGEW +E YEG IG RS+Y+++FITQR+Q+ + AEP+TIERLM++ SG+T V + + + Sbjct 1103 MVGEWYRENYEGDIGCRSNYSSVFITQRHQDFKGAEPKTIERLMILCSGITYVYKDNKQK 1162 Query 63 ATETDQISVYFFSKKQWYTVKPRYPAD-YVGEPFGARQRHVACFFETHNPIARPTRPPVP 121 TD++ VYFFS+K+WY +K + D Y+ + RQRHV CFFE+ N + R R PVP Sbjct 1163 IVSTDEVFVYFFSQKKWYLLKGKLCNDEYL---YNGRQRHVGCFFESKNVLGRANRNPVP 1219 Query 122 CLFIHGGFRR 131 C+FI GGF++ Sbjct 1220 CVFIQGGFKK 1229 Lambda K H 0.324 0.140 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22935578866 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40