bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6002_orf2 Length=153 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0170 215 3e-55 > 5833.PF13_0170 Length=918 Score = 215 bits (548), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 101/152 (66%), Positives = 126/152 (82%), Gaps = 1/152 (0%) Query 2 HLYHASDYFPQLYSWAEQLIEKGLAFVDFDSLEEIRRKRGSITEPGEDSPYRNKFTIEEN 61 HLY AS+YF QLY WA+ LI++G A+VD S+EEIR+ RG++ +PG DSPYRN+ T+EEN Sbjct 350 HLYFASNYFEQLYEWAKILIKQGDAYVDDQSIEEIRKNRGNLKDPGVDSPYRNR-TVEEN 408 Query 62 LMHFRKMRDGEYEEGQCVLRAKIDMAHKNVVMRDPIMYRILKKEHPRTGNKWVIYPMYDY 121 L F M++G Y+EG+ VLRAKI+M N+ +RDPI+YRI+ K HP+T NKWVIYPMYDY Sbjct 409 LQLFENMKNGLYKEGEKVLRAKINMKSGNMNLRDPILYRIMYKIHPKTKNKWVIYPMYDY 468 Query 122 AHGQSDSIEKITHSICTLEFDLNRQLYDWFQE 153 AHGQSDSIEKITHSICTLEF+ +R LY+WFQE Sbjct 469 AHGQSDSIEKITHSICTLEFETHRPLYEWFQE 500 Lambda K H 0.321 0.138 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23213563385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40