bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5840_orf4 Length=130 Score E Sequences producing significant alignments: (Bits) Value 7165.AGAP011800-PA 146 2e-34 > 7165.AGAP011800-PA Length=333 Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 70/129 (54%), Positives = 95/129 (73%), Gaps = 2/129 (1%) Query 1 DSADFEAIKEFSPTDATTNPTLVLQAVSNSKYKNLFQKAINEAQEASKGKDLEATVEEAV 60 D+ DFEA+K + PTDATTNP+L+L A +Y++L KAI Q+A G L+ V EA Sbjct 29 DTGDFEAMKTYKPTDATTNPSLILSAAGMEQYQHLIDKAIKHGQKA--GTTLDEQVSEAA 86 Query 61 DRVLVGFGMELLEIIPGLVSTEIPAELSFDTEGSVARARRIIELYKSKGISKDRILIKVA 120 D + V FG E+L+++PG VSTEI A LSF+ E SVA+A ++I LY+ +GI +DR+LIK+A Sbjct 87 DMLFVLFGCEILKLVPGRVSTEIDARLSFNKEASVAKALKLIALYEERGIKRDRVLIKLA 146 Query 121 ATWEGIQAA 129 +TWEGIQAA Sbjct 147 STWEGIQAA 155 Lambda K H 0.312 0.129 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23020010250 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40