bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5754_orf2 Length=118 Score E Sequences producing significant alignments: (Bits) Value 5085.AFUA_3G09360 122 4e-27 > 5085.AFUA_3G09360 Length=435 Score = 122 bits (305), Expect = 4e-27, Method: Composition-based stats. Identities = 56/118 (47%), Positives = 86/118 (72%), Gaps = 2/118 (1%) Query 1 SEGDFRYLARELEGFSGSDISVLVRDALFEPIRRCRTATAFKQVMINGCAFFVPCHPGDS 60 ++ D+R LA EG+SGSDIS+ V+DAL +PIR+ +TAT +K+VM++G PC PGDS Sbjct 320 TQADYRTLAEMSEGYSGSDISIAVQDALMQPIRKIQTATHYKKVMVDGAEKLTPCSPGDS 379 Query 61 DPTARKMALMSVPADRLLPPEVTMEDFHSALRHTRPSVSPEDLRMHISWTEQFGLEGS 118 A +M+ + + AD+LL P + ++DF A+R++RP+VS EDL+ + WT++FG EG+ Sbjct 380 G--AIEMSWVDIEADQLLEPPLMLKDFIKAVRNSRPTVSQEDLQRNAEWTKEFGSEGA 435 Lambda K H 0.323 0.137 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22460540320 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40