bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5753_orf1 Length=137 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0920c 117 1e-25 > 5833.PFE0920c Length=229 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 52/131 (39%), Positives = 87/131 (66%), Gaps = 1/131 (0%) Query 7 VQNSSEGCGA-PCFLSATEPMISMPDYLERLARFFQCSGECFVLALVYIDRPLQMNNHVW 65 ++ ++ G G F ++ P IS+ +Y ER+ ++ CS ECFVL ++Y+DR ++++ + Sbjct 29 IKMNNRGVGKITSFHASKVPDISLKNYTERIGKYIGCSNECFVLLIIYLDRLIKIHKDIS 88 Query 66 LCPLNLHRLAVTALMVAVKFADDTFYSNAYYAKVGGLPLQEMNHLEATLLRMLHFRLHVM 125 L L +HRL +TA M++VKF DD +YSN+YYAK+GG+ +E+N LE L ++ ++L V Sbjct 89 LSLLCIHRLVITAAMISVKFFDDLYYSNSYYAKIGGVTTKELNKLEIYFLNLIDYKLFVS 148 Query 126 PCEFDKYFKLV 136 E+D Y K + Sbjct 149 SQEYDFYRKYI 159 Lambda K H 0.330 0.142 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22428990562 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40