bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5621_orf2 Length=104 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_2140 115 3e-25 > 5807.cgd7_2140 Length=490 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 0/103 (0%) Query 2 RRRERREAAAAAAAAAAEAGDAAELRKQLARSVRVTREQNEDVKRLLLLLGLPLLQAPGE 61 +R ERRE A A A E GD ++KQ R++ VT++Q EDVK+LL LG+P + AP E Sbjct 101 KRDERREKALAELEKAQEIGDEELIKKQSVRTIHVTKKQVEDVKKLLGFLGMPCIDAPSE 160 Query 62 AEAQCAALARAGKVWAAATEDADALTFGAPILLRNLTFSDSSS 104 AEAQCA L + G V+ TEDAD+LTFG PI ++ L FS+SS+ Sbjct 161 AEAQCAELCKDGLVYGVVTEDADSLTFGTPIQIKQLNFSESSN 203 Lambda K H 0.315 0.125 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22759408663 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40