bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5547_orf1 Length=141 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL8P1.16 104 9e-22 > 5833.MAL8P1.16 Length=216 Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 16/138 (11%) Query 4 PTERVLYQLGATYGPGIRHLQAWRLIMPVFLHVGIVHLLFNVLFILHMGLDKEIKYGRTN 63 P +L LGATYGP I+ Q WRL++P+FLH + HL+ N+L IL++GL E Sbjct 68 PNVHILILLGATYGPLIKEGQYWRLVLPIFLHANLWHLIINILCILNLGLIIETT----- 122 Query 64 FLILYFSSALIGNMFTVLMRPCSLAVGASTAGFGLVGSILAEILIVWHKLDERTRNMYTL 123 GN+ T + PC LAVGAST+GFGL+G + EI + W L + +N Y L Sbjct 123 -----------GNILTTICNPCQLAVGASTSGFGLIGCSIFEIFLAWKNLTRKAKNYYIL 171 Query 124 DMTVFGALMILLSYDIQV 141 ++ +F + +S+ V Sbjct 172 NIFLFLLFFMFVSFSPSV 189 Lambda K H 0.332 0.146 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22827922775 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40