bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5529_orf1 Length=83 Score E Sequences producing significant alignments: (Bits) Value 9371.ENSETEP00000006785 62.8 3e-09 > 9371.ENSETEP00000006785 Length=228 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%) Query 4 RTPYSPYSKLIDDCIKEGRIVPVRITMTLLLRKM---LLADF-RGLFLIDGFPRNVDILG 59 + P S Y +LI+ CIKEG+IVPV IT++LL R+M + A+ + FLIDGFPRN D L Sbjct 75 KNPDSQYGELIEKCIKEGKIVPVEITISLLKREMDQTMTANVQKNKFLIDGFPRNQDNLQ 134 Query 60 G 60 G Sbjct 135 G 135 Lambda K H 0.329 0.145 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22659344793 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40