bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_5492_orf3
Length=141
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0647 112 3e-24
> 5833.PF14_0647
Length=1656
Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/138 (43%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Query 1 AWTARGLQDAFARLLPSDFVLRIMGALLFEGSMALFRFSLALVQMLEPDLMACDTIEAAE 60
AWTAR +QD F+R+LP DFVLRI G LFEG L + LAL++ LE D++ C IE E
Sbjct 1372 AWTARCIQDGFSRMLPFDFVLRIYGIYLFEGQKTLCLYCLALLKFLENDILKCTNIEEVE 1431
Query 61 KVLYRCSTDPRLSINVLSTTARNLKTHIWRVLGEASTGLQSPYLMSTKIHEFLTIKPEGQ 120
+LY P L IN L+ A K + ST SPYLM+ K+ F +
Sbjct 1432 NILYHICMHPYLDINELTQIAYRFKLKSKEKHLKFSTKCPSPYLMNVKLKTFYRPRLNDN 1491
Query 121 STIISSMGTWETIWRWLP 138
ST+I+S WE IW +P
Sbjct 1492 STLINSF-HWENIWEKIP 1508
Lambda K H
0.323 0.134 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22827922775
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40