bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5446_orf1 Length=147 Score E Sequences producing significant alignments: (Bits) Value 7227.CG33123-PA 176 2e-43 > 7227.CG33123-PA Length=1182 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 84/143 (58%), Positives = 99/143 (69%), Gaps = 9/143 (6%) Query 10 HSPQTMHQ-----FSFVLSWLKEWACSRSYGLGTFLPWTTDTDAPVLIESLSDSTIYMAY 64 H +T H+ F L+WL E+ACSR+YGLGT LPW D LIESLSDSTIYMA+ Sbjct 548 HGMETFHEEARNNFEACLNWLHEYACSRTYGLGTKLPW----DDKWLIESLSDSTIYMAF 603 Query 65 YTVAHLMQGGDIYGDTPGPLGLTPADLTEQFFDYIFLLRDEPPKDTKVSLENLNRLRAEF 124 YTV HL+QGG G+ PGP G+ P+D+T + +DYIF PK T + E+L LR EF Sbjct 604 YTVVHLLQGGTFRGEKPGPFGIKPSDMTGEIWDYIFFKETPLPKKTAIKQEHLAVLRREF 663 Query 125 SYWYPMDLRVSGKDLIFNHLTFC 147 YWYPMDLRVSGKDLI NHLTFC Sbjct 664 EYWYPMDLRVSGKDLIQNHLTFC 686 Lambda K H 0.322 0.139 0.455 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23033159460 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40