bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5444_orf2 Length=149 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0041 233 1e-60 > 5833.PF10_0041 Length=1235 Score = 233 bits (595), Expect = 1e-60, Method: Composition-based stats. Identities = 100/149 (67%), Positives = 126/149 (84%), Gaps = 0/149 (0%) Query 1 IEENVKGVRFKLVDAEIAKDAVHRGGGQIIPSARRVAYSALLLATPRLLEPIMFSEIQCP 60 IEE++KGV+ K++ A+I D ++RG GQIIP+ARR YS++LLATPRLLEPI+ +EI C Sbjct 1046 IEESMKGVKVKILRADIDDDPINRGAGQIIPTARRAIYSSVLLATPRLLEPILLTEIICS 1105 Query 61 ADCVSAIYTVLARRRGNVARDMPKPGTPLYIVHAYLPAIESFGFETDLRTHTSGQAMCLT 120 D VSA+Y VL+RRRG+V +D PK GTPLY+VHAY+PAIESFGFETDLRTHTSGQA C++ Sbjct 1106 GDSVSAVYNVLSRRRGHVLKDFPKVGTPLYMVHAYIPAIESFGFETDLRTHTSGQAFCIS 1165 Query 121 VFDNWAIVPGDPLDKQIVFKPLEPAPAPH 149 +FD+W IVPGDPLDK ++ +PLEPAP H Sbjct 1166 MFDHWHIVPGDPLDKSVILRPLEPAPIQH 1194 Lambda K H 0.323 0.139 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40