bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5405_orf3 Length=98 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_4220 119 3e-26 > 5807.cgd7_4220 Length=532 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/95 (64%), Positives = 73/95 (76%), Gaps = 0/95 (0%) Query 1 KLGVAAFADALLVIPKTLAENSGLDVYQVLLALLDKHQTSQQLAGLDLDSGKPNAPALEG 60 K G+ FADALL IPKTLAEN+GLD + L +LDK + S+Q G+DL +G+ P EG Sbjct 438 KFGLDIFADALLAIPKTLAENAGLDQQETTLNILDKIEDSKQPLGIDLTTGEEFYPLTEG 497 Query 61 IWDNYKVKRQMLSLAPTLAQQLLLVDEVLKAGKSM 95 I DNY VKRQ+LS+APTLAQQLLLVDEV+KAGK M Sbjct 498 ILDNYCVKRQILSIAPTLAQQLLLVDEVIKAGKQM 532 Lambda K H 0.315 0.132 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22397725590 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40