bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5370_orf1 Length=155 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_450 111 5e-24 > 5807.cgd8_450 Length=306 Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/156 (44%), Positives = 108/156 (69%), Gaps = 4/156 (2%) Query 1 SSEEAIRKQYRKLSLLIHPDKCKHELAQEAFQIVNKAYEKLQEEGVRLKYEGVIEEAKKR 60 S + I K+YRKLSLLIHPDK HE A+EAF+I+NKAYE+LQ+ R+KY+ V + A++ Sbjct 136 SDDSVIGKKYRKLSLLIHPDKTSHEKAREAFEILNKAYEELQKAENRVKYKEVWKRAEE- 194 Query 61 VLKKRIQENKSRKAAGERLLPET-EEALRGEILECCELLLKELKEKQDYKERCRAANEKY 119 ++KK ++NK K ++ ET ++ +++E CE LL +L+E+++Y E+C AN ++ Sbjct 195 LVKKENKKNKLFKK--DQQDQETYKKEFNKQVIEMCEKLLNDLQERKEYSEKCLLANHRF 252 Query 120 EKEKEDKLIEEEKEKCRERNEWVKKREERVSSWREY 155 E+E + ++EEKE+C +R +W +K EER WR Y Sbjct 253 EQELYRQKLQEEKERCVQRQKWNEKFEERAQGWRSY 288 Lambda K H 0.310 0.129 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23746592502 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40