bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5349_orf2 Length=165 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0346 309 2e-83 > 5833.PF14_0346 Length=853 Score = 309 bits (792), Expect = 2e-83, Method: Composition-based stats. Identities = 138/164 (84%), Positives = 148/164 (90%), Gaps = 0/164 (0%) Query 2 HPFIIRLVRTFRDKEFLYFLTELVTGGELYDAIRKLGLLGRYQAQFYLASIVLAIEYLHE 61 HPFIIRLVRTF+D ++ YFLTELVTGGELYDAIRKLGLL + QAQFYL SI+LAIEYLHE Sbjct 598 HPFIIRLVRTFKDSKYFYFLTELVTGGELYDAIRKLGLLSKSQAQFYLGSIILAIEYLHE 657 Query 62 RNIAYRDLKPENILLDSQGYVKLINFGCAKKMQGRAYTLVGTPHYMAPEVILGKGYTLTA 121 RNI YRDLKPENILLD QGYVKLI+FGCAKK+QGRAYTLVGTPHYMAPEVILGKGY T Sbjct 658 RNIVYRDLKPENILLDKQGYVKLIDFGCAKKVQGRAYTLVGTPHYMAPEVILGKGYGCTV 717 Query 122 DTWAFGVCLYEFMCGPLPFGNDAEDQLEIFRDILAGKLIFPHYV 165 D WA G+CLYEF+CGPLPFGND EDQLEIFRDIL G+L FP YV Sbjct 718 DIWALGICLYEFICGPLPFGNDEEDQLEIFRDILTGQLTFPDYV 761 Lambda K H 0.328 0.147 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29254071491 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40