bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5274_orf3 Length=162 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0231601 183 1e-45 > 44689.DDB_0231601 Length=886 Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 87/162 (53%), Positives = 116/162 (71%), Gaps = 0/162 (0%) Query 1 NHACTAVFRQAKTIQTEMKDTHLAVDHLLLAVCENRTIKHVLQQAGCDYKKIKEVCMKLR 60 N V R A Q D+HLAVDHL+L + ++R I VL AG +++ + ++R Sbjct 86 NSLFLQVLRSAARHQKNNGDSHLAVDHLILGLLDDRDILSVLGDAGATKEQVIQAVKEIR 145 Query 61 AGARVTGDAADQNFDALTKYGIDFTDLAEQGKLDPVIGRDEEIRRVIRILCRRTKNNPVL 120 ++T A+ ++AL+KYG D A++GKLDPVIGRDEEIRRVIR+L RRTKNNPVL Sbjct 146 GNKKITSKTAESTYEALSKYGYDLVSQAQEGKLDPVIGRDEEIRRVIRVLSRRTKNNPVL 205 Query 121 IGEPGVGKSAIVEGLARRVVEGDVPSSLRCRVISLDLGALIS 162 IGEPGVGK+A+VEGLA+R+V GD+P +L RVI+LD+GALI+ Sbjct 206 IGEPGVGKTAVVEGLAQRIVRGDIPDNLNARVIALDMGALIA 247 Lambda K H 0.322 0.138 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 27386790332 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40