bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5140_orf2 Length=115 Score E Sequences producing significant alignments: (Bits) Value 8364.ENSXETP00000003994 73.2 2e-12 > 8364.ENSXETP00000003994 Length=5048 Score = 73.2 bits (178), Expect = 2e-12, Method: Composition-based stats. Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 6/90 (6%) Query 2 HCLNTIGSYECECKDGYG---HMEGNACSDIDECSEASTEIPENCNCVNTEGSFSLEAKP 58 C+NT GSY C + G G + EG AC D+DEC+++S P C+NT GS+ P Sbjct 4590 QCINTGGSYHCLLRCGPGFRPNAEGTACEDVDECAQSS---PCQQRCLNTIGSYRCACDP 4646 Query 59 GYELVDGKCVKIDFCARGACNSLAHCKDVV 88 GY+L CV I+ C RG C CK+ + Sbjct 4647 GYQLRGTICVDINECLRGVCQPQQQCKNTL 4676 Lambda K H 0.319 0.135 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22698934816 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40