bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_5089_orf2
Length=80
Score E
Sequences producing significant alignments: (Bits) Value
177439.DP0053 83.6 2e-15
> 177439.DP0053
Length=292
Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
Query 1 GYKFLRGMHLNDSKSELSSGLDRHELLGKGHLGLAPFKYIMQHQTRFKDMPLILETPDPT 60
G+K+LRGMHLND+KSE S +DRH+ LG G++G F+YIM+ RF D+PLILET D
Sbjct 208 GFKYLRGMHLNDAKSEFFSRVDRHQSLGAGNIGWEAFRYIMK-DDRFDDIPLILETVDT- 265
Query 61 EGTIWKKEIKQM 72
++W++EIK++
Sbjct 266 --SLWQEEIKKL 275
Lambda K H
0.319 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22875389805
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40