bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5083_orf2 Length=91 Score E Sequences producing significant alignments: (Bits) Value 272831.NMC1347 117 8e-26 > 272831.NMC1347 Length=867 Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 55/83 (66%), Positives = 62/83 (74%), Gaps = 3/83 (3%) Query 1 EVVRIYHTLLGTPGFRKGMDLYFQRHDNQAATCDDFRAAMADSNGVNLDQMERWYTQAGT 60 EVVR+YHTLLG GF+KGM LYFQRHD QA TCDDFRAAMAD+NG+NLDQ WY+QAGT Sbjct 382 EVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGT 441 Query 61 PRLEVXKAALNKETKVFEIRFKQ 83 P LE N +FE+ KQ Sbjct 442 PVLEAESRLKN---NIFELTIKQ 461 Lambda K H 0.322 0.136 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22919213550 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40